Factsheet for Os01t0646300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G233000.1	Wheat	plasma membrane	82.22	81.24
OQU87235	Sorghum	extracellular	47.68	80.0
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	82.83	77.5
Zm00001d044065_P001	Maize	cytosol	73.13	76.21
TraesCS3D01G220100.3	Wheat	cytosol, endoplasmic reticulum, plasma membrane	82.02	75.61
HORVU3Hr1G058100.1	Barley	plastid	82.02	72.11
KRG92263	Soybean	cytosol	46.26	57.39
Os05t0574900-01	Rice	plasma membrane	49.29	48.8
KRH34544	Soybean	cytosol	48.08	48.77
KRH54840	Soybean	cytosol	49.09	48.12
KRH63032	Soybean	cytosol	48.69	47.91
VIT_11s0016g04630.t01	Wine grape	plastid	49.9	46.43
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	54.14	43.86
Os03t0707600-01	Rice	nucleus	43.43	34.4
Os01t0948200-00	Rice	cytosol	29.49	33.03
Os07t0567700-02	Rice	cytosol	29.09	31.51
Os06t0211500-00	Rice	cytosol	11.11	28.8
Os06t0610350-01	Rice	cytosol	25.05	28.12
Os12t0138100-00	Rice	cytosol	26.87	27.03
Os02t0197300-00	Rice	cytosol	24.24	26.91
Os11t0141500-00	Rice	cytosol	26.67	26.83
Os05t0485400-00	Rice	peroxisome	26.67	26.4
Os04t0432100-00	Rice	nucleus	25.25	24.8
Os03t0723000-01	Rice	nucleus	28.89	24.74
Os12t0138200-00	Rice	cytosol	25.45	24.71
Os11t0141700-00	Rice	cytosol	25.25	24.7
Os06t0127800-01	Rice	plastid	29.7	23.82
Os11t0124300-01	Rice	nucleus, plastid	29.49	22.43
Os12t0122000-01	Rice	plastid	29.49	22.12
Os05t0378200-00	Rice	cytosol	24.04	21.6
Os05t0378500-00	Rice	plastid	22.83	20.18
Os11t0141550-01	Rice	cytosol	0.81	3.1
Os12t0138166-00	Rice	endoplasmic reticulum, extracellular	1.62	2.27

Protein Annotations

MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EntrezGene:4325922	EMBL:AK242412	UniProt:B7F9I5
ProteinID:BAS73406.1	ProteinID:EEE55078.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009723	GO:GO:0009737	GO:GO:0009791	GO:GO:0009863	GO:GO:0009867	GO:GO:0009938
GO:GO:0009987	GO:GO:0010187	GO:GO:0042538	GO:GO:0043565	GO:GO:2000033	GO:GO:2000377
InterPro:IPR005202	EnsemblPlantsGene:Os01g0646300	EnsemblPlants:Os01t0646300-01	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF7	InterPro:TF_GRAS	UniParc:UPI000188B056	RefSeq:XP_015624056.1	SEG:seg	:

Description

SLENDER RICE LIKE 1Similar to RGA2 protein. (Os01t0646300-01)

Coordinates

chr1:-:26044168..26045843

Molecular Weight (calculated)

52070.1 Da

IEP (calculated)

4.895

GRAVY (calculated)

-0.017

Length

495 amino acids

Sequence
(BLAST)

001: MAMDTFPFQW PMDPAASSGL DAGFLPPPAA VAPDDGVGYY DPPAGADVDA AALPEFAAAF PPCAPDAAAA VLAMRREEEE VAGIRLVHLL MSCAGAIEAG
101: DHALASAQLA DSHAALAAVS AASGIGRVAV HFTTALSRRL FPSPVAPPTT DAEHAFLYHH FYEACPYLKF AHFTANQAIL EAFHGCDHVH VIDFSLMQGL
201: QWPALIQALA LRPGGPPFLR ITGIGPPSPT GRDELRDVGL RLADLARSVR VRFSFRGVAA NSLDEVRPWM LQIAPGEAVA FNSVLQLHRL LGDPADQAPI
301: DAVLDCVASV RPKIFTVIEQ EADHNKTGFL DRFTEALFYY SAVFDSLDAA SASGGAGNAM AEAYLQREIC DIVCGEGAAR RERHEPLSRW RDRLTRAGLS
401: AVPLGSNALR QARMLVGLFS GEGHSVEEAD GCLTLGWHGR PLFSASAWEA AGDGGGDNNN NSNSNVSGSS GSDSNNSGSS NGKSSGARDG SSVCL

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.