CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54840	Soybean	cytosol	94.63	94.26
KRG92263	Soybean	cytosol	65.81	82.96
KRH34544	Soybean	cytosol	77.53	79.92
VIT_11s0016g04630.t01	Wine grape	plastid	69.98	66.17
OQU87235	Sorghum	extracellular	33.2	56.61
TraesCS3A01G233000.1	Wheat	plasma membrane	48.71	48.9
Os01t0646300-01	Rice	cytosol	47.91	48.69
Zm00001d044065_P001	Maize	cytosol	45.33	48.0
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	57.65	47.46
KRH42544	Soybean	cytosol, nucleus, plastid	48.11	46.81
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	49.11	46.69
KRH58636	Soybean	nucleus	48.31	46.46
TraesCS3D01G220100.3	Wheat	cytosol, endoplasmic reticulum, plasma membrane	48.91	45.81
HORVU3Hr1G058100.1	Barley	plastid	48.71	43.52
KRG97933	Soybean	nucleus	49.5	42.64
KRH30942	Soybean	cytosol	49.7	42.02
TraesCS5A01G511900.1	Wheat	cytosol	35.98	41.51
TraesCS4B01G342800.1	Wheat	cytosol	36.18	41.36
Os05t0574900-01	Rice	plasma membrane	38.97	39.2
TraesCS1A01G413800.1	Wheat	cytosol, nucleus, plastid	37.38	39.0
TraesCS4D01G338800.1	Wheat	cytoskeleton, cytosol, peroxisome, plastid	36.78	37.83
Zm00001d009646_P001	Maize	plastid	35.59	37.68
TraesCS1D01G421200.1	Wheat	cytosol	37.38	37.01
TraesCS1B01G443800.1	Wheat	cytosol	36.78	35.78
HORVU1Hr1G090800.1	Barley	mitochondrion	37.18	34.89
KRH29015	Soybean	cytosol	19.28	34.04
KXG23987	Sorghum	cytosol	35.19	33.71
KRH29089	Soybean	mitochondrion	26.64	30.32
KRH29080	Soybean	cytosol	26.84	29.67
KRH34954	Soybean	cytosol	23.86	29.63
KRH24106	Soybean	cytosol, nucleus, peroxisome	26.64	29.45
KRH57194	Soybean	cytosol	29.42	28.96
KRH27822	Soybean	nucleus, plastid	26.64	28.33
KRH24117	Soybean	plastid	25.05	28.31
KRH03910	Soybean	cytosol	28.63	28.02
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	25.84	27.96
KRH62871	Soybean	cytosol	24.45	27.77
KRH44884	Soybean	cytosol	23.86	27.71
KRH29971	Soybean	cytosol	24.25	27.6
KRH13057	Soybean	cytosol	29.22	26.49
KRG91825	Soybean	nucleus	24.06	26.02
KRH19587	Soybean	cytosol	26.64	25.48
KRH06900	Soybean	plastid	34.59	25.36
KRG94590	Soybean	plastid	34.19	25.26
KRH24039	Soybean	cytosol	23.86	24.95
KRH32212	Soybean	cytosol	26.24	24.58
KRH70202	Soybean	cytosol	23.26	24.58
KRH08555	Soybean	cytosol	22.86	24.42
KRH57249	Soybean	plastid	30.42	23.04
KRH03976	Soybean	mitochondrion, nucleus	30.42	22.87
KRH40615	Soybean	nucleus, plastid	29.62	18.1
KRH00551	Soybean	nucleus, plastid	29.82	17.81

Protein Annotations

Gene3D:1.10.10.1290	EntrezGene:100805968	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EMBL:ACUP02002572
InterPro:DELLA_N_sf	EnsemblPlantsGene:GLYMA_04G150500	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009723	GO:GO:0009737	GO:GO:0009791	GO:GO:0009863	GO:GO:0009867	GO:GO:0009938
GO:GO:0009987	GO:GO:0010187	GO:GO:0042538	GO:GO:0043565	GO:GO:2000033	GO:GO:2000377
UniProt:I1JW83	InterPro:IPR005202	InterPro:IPR038088	EnsemblPlants:KRH63032	ProteinID:KRH63032	ProteinID:KRH63032.1
PFAM:PF03514	PFAM:PF12041	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF7	SMART:SM01129
InterPro:TF_DELLA_N	InterPro:TF_GRAS	UniParc:UPI00023393A7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:32893202..32895554

Molecular Weight (calculated)

56011.4 Da

IEP (calculated)

4.787

GRAVY (calculated)

-0.163

Length

503 amino acids

Sequence
(BLAST)

001: MASSSSNGSS SGSKSWDIDG DLAGFGYKVR SSELQHVAEN MERLENVMDI VNSSTNNNIS QLASDTIFYN PSDIGSWIDT LLSEFDQTAS LPYDFSELPD
101: LDTDQIQNLK PTLVTMEEDS GIRLVHTLMT CADSVQHGDL PFAGSLIENM QGLLAHVNTN IGIGKVAGYF IDALRRRIFA QGVFLTSCSY PIEDDVLYHH
201: YYEACPYLKF AHFTANQAIL EAFNGHDCVH VIDFNLMQGL QWPALIQALA LRPGGPPLLR LTGIGLPSSD NRDTLREIGL RLAELARSVN VRFAFRGVAA
301: WRLEDVKPWM LQVNPNEAVA VNSIMQLHRL LASDSDPAGS GIETVLGWIR SLNPKIISVV EQEANHNEDM FLERFTEALH YYSTVFDSLE ACPVEPDKAL
401: AEMYLQREIC NVVCCEGPAR VERHEPLDKW RKRLGKAGFK PLHLGSNAYK QASMLLTLFS AEGYCVEENQ GCLTLGWHSR PLIAASAWHA APVQDRETLR
501: FEQ

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.