CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32212	Soybean	cytosol	92.78	90.88
VIT_07s0005g03700.t01	Wine grape	cytosol	60.27	65.09
PGSC0003DMT400087504	Potato	nucleus	60.08	65.02
Solyc09g066450.1.1	Tomato	cytosol	59.7	62.8
KRH29089	Soybean	mitochondrion	34.41	40.95
KRH24117	Soybean	plastid	34.22	40.45
TraesCS1B01G314500.1	Wheat	peroxisome	35.17	40.13
HORVU1Hr1G069140.1	Barley	cytosol	35.17	39.61
EES18409	Sorghum	cytosol	36.12	38.54
TraesCS1A01G304000.1	Wheat	peroxisome	35.93	38.49
TraesCS1D01G303500.1	Wheat	peroxisome	35.17	37.91
Os05t0485400-00	Rice	peroxisome	35.74	37.6
Zm00001d038518_P001	Maize	cytosol	35.36	37.42
KRH29015	Soybean	cytosol	18.63	34.39
KRG92263	Soybean	cytosol	23.95	31.58
KRH34954	Soybean	cytosol	22.43	29.14
KRH24039	Soybean	cytosol	24.71	27.03
KRH63032	Soybean	cytosol	25.48	26.64
KRH34544	Soybean	cytosol	24.71	26.64
KRH54840	Soybean	cytosol	25.48	26.53
KRH24106	Soybean	cytosol, nucleus, peroxisome	22.62	26.15
KRH42544	Soybean	cytosol, nucleus, plastid	25.48	25.92
KRG91825	Soybean	nucleus	22.81	25.81
KRH29080	Soybean	cytosol	22.24	25.71
KRH70202	Soybean	cytosol	23.0	25.42
KRH40615	Soybean	nucleus, plastid	39.54	25.27
KRH58636	Soybean	nucleus	25.1	25.24
KRH29971	Soybean	cytosol	21.1	25.11
KRH62871	Soybean	cytosol	21.1	25.06
KRH08555	Soybean	cytosol	22.43	25.05
KRH00551	Soybean	nucleus, plastid	39.73	24.82
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	20.91	23.66
KRH27822	Soybean	nucleus, plastid	21.1	23.47
KRH13057	Soybean	cytosol	24.52	23.24
KRH30942	Soybean	cytosol	26.05	23.03
KRG97933	Soybean	nucleus	25.48	22.95
KRH44884	Soybean	cytosol	18.44	22.4
KRH57194	Soybean	cytosol	21.48	22.11
KRH03910	Soybean	cytosol	20.91	21.4
KRH57249	Soybean	plastid	27.0	21.39
KRH03976	Soybean	mitochondrion, nucleus	27.0	21.23
KRG94590	Soybean	plastid	27.19	21.0
KRH06900	Soybean	plastid	27.38	20.99

Protein Annotations

EntrezGene:100775656	MapMan:15.5.12	EMBL:ACUP02008191	EnsemblPlantsGene:GLYMA_13G124900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1LYM4	InterPro:IPR005202	EnsemblPlants:KRH19587
ProteinID:KRH19587	ProteinID:KRH19587.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF22
InterPro:TF_GRAS	UniParc:UPI000296946B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:23835044..23837037

Molecular Weight (calculated)

59135.3 Da

IEP (calculated)

6.444

GRAVY (calculated)

-0.233

Length

526 amino acids

Sequence
(BLAST)

001: MMNVGFEVIH ANYNPNMIHP HMHETWDHYS NTITSLPFSA PTPSNPYPKP ATENNHCLNL GQNELCDWME EHISDITKHF VEDLPETTTS DNLLSNNPTG
101: VVSHHNLGVP SLLSPNFTQR KPSCFRPQFE SFTNDPPNFN LHIQTNTSTL DQNKHNVYDQ GLNLITLLME CAVAISVDNL GEAHRMLLEL TQMASPYKAS
201: CAERVVAYFA KAMTSRVMNS WLGVCSPLVD HKSINSAFQV FNNISPFIKF AHFTSNQAIL EAVSHCDSIH IIDLDIMQGL QWPAFFHILA TRMEGKPKVT
301: MTGLGASMEL LVETGKQLTN FARRLGLSLK FHPIATKFGE VIDVSMLHVK PGEAVAVHWL QHSLYDATGP DWKTLRLLEE LEPRIITLVE QDVNHGGSFL
401: DRFVASLHYY STLFDSLGAY LHNDDSNRHR VEHGLLSREI NNVLAIGGPK RSGEDNFRQW RSELARHCFV KQVPLSDNSM AQAQLILNMF SPAYGYSLAQ
501: VEGTLRLGWK DTSLYTASAW TCCNSS

Best Arabidopsis Sequence Match ( AT1G66350.1 )
(BLAST)

001: MKREHNHRES SAGEGGSSSM TTVIKEEAAG VDELLVVLGY KVRSSDMADV AHKLEQLEMV LGDGISNLSD ETVHYNPSDL SGWVESMLSD LDPTRIQEKP
101: DSEYDLRAIP GSAVYPRDEH VTRRSKRTRI ESELSSTRSV VVLDSQETGV RLVHALLACA EAVQQNNLKL ADALVKHVGL LASSQAGAMR KVATYFAEGL
201: ARRIYRIYPR DDVALSSFSD TLQIHFYESC PYLKFAHFTA NQAILEVFAT AEKVHVIDLG LNHGLQWPAL IQALALRPNG PPDFRLTGIG YSLTDIQEVG
301: WKLGQLASTI GVNFEFKSIA LNNLSDLKPE MLDIRPGLES VAVNSVFELH RLLAHPGSID KFLSTIKSIR PDIMTVVEQE ANHNGTVFLD RFTESLHYYS
401: SLFDSLEGPP SQDRVMSELF LGRQILNLVA CEGEDRVERH ETLNQWRNRF GLGGFKPVSI GSNAYKQASM LLALYAGADG YNVEENEGCL LLGWQTRPLI
501: ATSAWRINRV E

Arabidopsis Description

RGL1DELLA protein RGL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8Y3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.