CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19587	Soybean	cytosol	90.88	92.78
VIT_07s0005g03700.t01	Wine grape	cytosol	58.47	64.48
PGSC0003DMT400087504	Potato	nucleus	58.1	64.2
Solyc09g066450.1.1	Tomato	cytosol	58.1	62.4
KRH29089	Soybean	mitochondrion	33.89	41.18
KRH24117	Soybean	plastid	33.52	40.45
TraesCS1B01G314500.1	Wheat	peroxisome	33.89	39.48
HORVU1Hr1G069140.1	Barley	cytosol	33.89	38.97
TraesCS1A01G304000.1	Wheat	peroxisome	34.64	37.88
Os05t0485400-00	Rice	peroxisome	35.2	37.8
EES18409	Sorghum	cytosol	34.64	37.73
TraesCS1D01G303500.1	Wheat	peroxisome	33.71	37.09
Zm00001d038518_P001	Maize	cytosol	34.08	36.82
KRH29015	Soybean	cytosol	18.25	34.39
KRG92263	Soybean	cytosol	22.91	30.83
KRH34954	Soybean	cytosol	21.79	28.89
KRH24039	Soybean	cytosol	24.21	27.03
KRH63032	Soybean	cytosol	24.58	26.24
KRH34544	Soybean	cytosol	23.84	26.23
KRH54840	Soybean	cytosol	24.58	26.14
KRG91825	Soybean	nucleus	22.53	26.02
KRH24106	Soybean	cytosol, nucleus, peroxisome	21.79	25.71
KRH42544	Soybean	cytosol, nucleus, plastid	24.58	25.53
KRH29080	Soybean	cytosol	21.42	25.27
KRH70202	Soybean	cytosol	22.35	25.21
KRH40615	Soybean	nucleus, plastid	38.17	24.91
KRH29971	Soybean	cytosol	20.48	24.89
KRH58636	Soybean	nucleus	24.21	24.86
KRH08555	Soybean	cytosol	21.79	24.84
KRH62871	Soybean	cytosol	20.3	24.61
KRH00551	Soybean	nucleus, plastid	38.36	24.47
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	20.3	23.44
KRH27822	Soybean	nucleus, plastid	20.3	23.04
KRH13057	Soybean	cytosol	23.65	22.88
KRG97933	Soybean	nucleus	24.39	22.43
KRH30942	Soybean	cytosol	24.77	22.35
KRH44884	Soybean	cytosol	17.69	21.94
KRH57194	Soybean	cytosol	20.67	21.72
KRH03910	Soybean	cytosol	20.11	21.01
KRH57249	Soybean	plastid	25.51	20.63
KRH03976	Soybean	mitochondrion, nucleus	25.51	20.48
KRG94590	Soybean	plastid	25.88	20.41
KRH06900	Soybean	plastid	26.07	20.41

Protein Annotations

EntrezGene:100785242	MapMan:15.5.12	EMBL:ACUP02006104	EnsemblPlantsGene:GLYMA_10G038500	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	UniProt:K7LHB2	EnsemblPlants:KRH32212
ProteinID:KRH32212	ProteinID:KRH32212.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF22
InterPro:TF_GRAS	UniParc:UPI00023C93EF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:3413962..3416015

Molecular Weight (calculated)

60410.7 Da

IEP (calculated)

6.472

GRAVY (calculated)

-0.278

Length

537 amino acids

Sequence
(BLAST)

001: MMKVGFEVVH ANYNSNMIRP HMHETWDDHY SNNITTSLPF SSPTTPSNPY PKPATENNHC LNMGQNNELC DWMEEQVSDF TKHLVEDFPE TTTTSDNLLS
101: NNPTRVNIAS HHNLNVPSLL SPKFSQRKPS CLFRPQFESF TNNDPPNFNL HIQTNTSTLD QSQHNVVYDQ GLSLITLLME CAVAISVDNL GEAHRMLLEL
201: TQVSSPYKAS CAERVVAYFA KAMTSRVMNS WLGVCSPLVD HKSINSSFQV FNNISPFIKF AHFTSNQAIL EAVSHCDSIH IIDLDIMQGL QWPAFFHILA
301: TRMEGKPQVT MTGFGASMEL LVETGKQLTN FARRLGMSLK FLPIATKIGE VIDVSTLHVK PGEAVAVHWL QHSLYDATGP DWKTLRLLEE LEPRIITLVE
401: QDVNHGGGGS FLDRFVASLH YYSTLFDSLG AYLHNDDENR HRVEHGLLSR EINNVLGIGG PKRSEDKFRQ WRNELARHCF VKQVPMSANS MAQAQLILNM
501: FSPAYGYSLA QVEGTLRLGW KDTSLYTASA WTCSNSS

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.