CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH06900	Soybean	plastid	93.54	92.86
PGSC0003DMT400052191	Potato	cytosol	45.67	82.93
VIT_14s0068g01610.t01	Wine grape	plastid	70.04	71.41
OQU83473	Sorghum	cytosol	40.53	65.4
Solyc02g094340.1.1	Tomato	nucleus	65.2	65.29
GSMUA_Achr6P20830_001	Banana	nucleus	50.66	56.56
TraesCS2D01G095300.1	Wheat	nucleus	51.1	48.67
TraesCS2B01G112100.1	Wheat	nucleus	51.1	48.67
TraesCS2A01G096800.1	Wheat	nucleus	50.95	48.53
Zm00001d049249_P001	Maize	plastid	52.13	45.81
KRG92263	Soybean	cytosol	23.49	40.1
KRH34544	Soybean	cytosol	25.26	35.25
KRH29015	Soybean	cytosol	14.68	35.09
KRH03910	Soybean	cytosol	26.43	35.02
KRH57194	Soybean	cytosol	25.84	34.44
KRH63032	Soybean	cytosol	25.26	34.19
KRH29089	Soybean	mitochondrion	22.17	34.16
KRH34954	Soybean	cytosol	20.12	33.83
KRH54840	Soybean	cytosol	24.96	33.66
KRH42544	Soybean	cytosol, nucleus, plastid	25.4	33.46
KRH58636	Soybean	nucleus	25.4	33.08
KRH24106	Soybean	cytosol, nucleus, peroxisome	21.88	32.75
KRH29080	Soybean	cytosol	21.73	32.53
KRG97933	Soybean	nucleus	27.61	32.19
KRH24117	Soybean	plastid	21.0	32.13
KRH30942	Soybean	cytosol	27.46	31.43
KRG91825	Soybean	nucleus	21.15	30.97
KRH70202	Soybean	cytosol	21.59	30.88
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	21.0	30.75
KRH08555	Soybean	cytosol	21.15	30.57
KRH62871	Soybean	cytosol	19.82	30.47
KRH27822	Soybean	nucleus, plastid	21.15	30.44
KRH29971	Soybean	cytosol	19.68	30.32
KRH13057	Soybean	cytosol	24.23	29.73
KRH44884	Soybean	cytosol	17.91	28.18
KRH24039	Soybean	cytosol	19.68	27.86
KRH19587	Soybean	cytosol	21.0	27.19
KRH32212	Soybean	cytosol	20.41	25.88
KRH57249	Soybean	plastid	24.52	25.15
KRH03976	Soybean	mitochondrion, nucleus	24.23	24.66
KRH40615	Soybean	nucleus, plastid	26.28	21.75
KRH00551	Soybean	nucleus, plastid	26.14	21.14

Protein Annotations

EntrezGene:100805039	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.9.2.1	MapMan:26.9.2.3	EMBL:ACUP02011994
ncoils:Coil	EnsemblPlantsGene:GLYMA_19G096400	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR005202	UniProt:K7MXH7	EnsemblPlants:KRG94590	ProteinID:KRG94590	ProteinID:KRG94590.1
PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF3	InterPro:TF_GRAS	UniParc:UPI000233F5D4
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:34001249..34004783

Molecular Weight (calculated)

75386.9 Da

IEP (calculated)

6.157

GRAVY (calculated)

-0.385

Length

681 amino acids

Sequence
(BLAST)

001: MMNSLCGSSL SLKSENNNSR TKLQQPTSSN DSVLQSKKNN ATQSSGDLDQ TSLTPPSLNL PSLKFDLDGD VEVQSPDSSM WESFFADHID GDFMISSPVR
101: TPQAASSYNC NYNYAQGMQG QSLSGCSPPR FSSSQIGAFN SSSSLNKGKG LSPLHRVFNS PNNQYMQHVE NLSLPAIEEF LEDYQTKVSS SDHNITSSSE
201: CFDLSSHQIP SSILDGLALH NSSRYHRGSV VDEESTVHGG GGGGGGSSQL SQESDIYHQM GSMASASLSQ ALQQERYQEK QQKQQAQQLQ QQQRQHQQEN
301: LMVPIPIEIE QEQDSGLQLV HLLLACAEAV AKEEYMLARR YLHHLNRVVT PLGDSMQRVA VCFTDSLSAR LNSTLTPKPA TPSKPLTPSN SLEVLKIYQI
401: VYQACPYVKF AHFTANQAIF EAVEIEERVH VIDLDILQGY QWPAFMQALA ARPAGAPFLR ITGVGPLLDA VRETGRCLTE LAHSLRIPFE FHAVGEQLED
501: LKPHMLNRRV GEALAVNAVN HLHRVPGNHL GNLLTMLRDQ APSIVTLVEQ EASHNGPYFL GRFLEALHYY SAIFDSLDAT FPAESAQRAK VEQYIFAPEI
601: RNIVACEGAE RFERHERLEK WRKIMEGKGF KGVALSPNAV TQSKILLGLY SCEGYRLTED KGCLLLGWQD RAIIAASAWR C

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.