CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94590	Soybean	plastid	92.86	93.54
PGSC0003DMT400052191	Potato	cytosol	45.34	82.93
VIT_14s0068g01610.t01	Wine grape	plastid	69.83	71.71
Solyc02g094340.1.1	Tomato	nucleus	64.14	64.71
OQU83473	Sorghum	cytosol	39.8	64.69
GSMUA_Achr6P20830_001	Banana	nucleus	49.56	55.74
TraesCS2D01G095300.1	Wheat	nucleus	50.0	47.97
TraesCS2B01G112100.1	Wheat	nucleus	49.85	47.83
TraesCS2A01G096800.1	Wheat	nucleus	49.71	47.69
Zm00001d049249_P001	Maize	plastid	50.87	45.03
KRG92263	Soybean	cytosol	23.62	40.6
KRH03910	Soybean	cytosol	26.82	35.8
KRH34544	Soybean	cytosol	25.22	35.45
KRH29015	Soybean	cytosol	14.72	35.44
KRH57194	Soybean	cytosol	26.09	35.03
KRH63032	Soybean	cytosol	25.36	34.59
KRH29089	Soybean	mitochondrion	22.16	34.39
KRH34954	Soybean	cytosol	20.12	34.07
KRH54840	Soybean	cytosol	25.07	34.06
KRH42544	Soybean	cytosol, nucleus, plastid	25.22	33.46
KRH58636	Soybean	nucleus	25.22	33.08
KRH24106	Soybean	cytosol, nucleus, peroxisome	21.72	32.75
KRH29080	Soybean	cytosol	21.57	32.53
KRH24117	Soybean	plastid	20.99	32.36
KRG97933	Soybean	nucleus	27.11	31.85
KRH30942	Soybean	cytosol	27.26	31.43
KRG91825	Soybean	nucleus	20.85	30.75
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	20.7	30.54
KRH70202	Soybean	cytosol	21.14	30.46
KRH62871	Soybean	cytosol	19.53	30.25
KRH27822	Soybean	nucleus, plastid	20.85	30.23
KRH08555	Soybean	cytosol	20.7	30.15
KRH29971	Soybean	cytosol	19.39	30.09
KRH13057	Soybean	cytosol	24.05	29.73
KRH44884	Soybean	cytosol	17.49	27.71
KRH24039	Soybean	cytosol	19.39	27.65
KRH19587	Soybean	cytosol	20.99	27.38
KRH32212	Soybean	cytosol	20.41	26.07
KRH57249	Soybean	plastid	24.78	25.6
KRH03976	Soybean	mitochondrion, nucleus	24.49	25.11
KRH40615	Soybean	nucleus, plastid	26.09	21.75
KRH00551	Soybean	nucleus, plastid	25.95	21.14

Protein Annotations

MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.9.2.1	MapMan:26.9.2.3	UniProt:A0A0R0FYG5	EMBL:ACUP02009897
ncoils:Coil	EnsemblPlantsGene:GLYMA_16G053000	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR005202	EnsemblPlants:KRH06900	ProteinID:KRH06900	ProteinID:KRH06900.1	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF3	InterPro:TF_GRAS	UniParc:UPI0006EDCD5F	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:5124089..5127509

Molecular Weight (calculated)

76150.7 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.405

Length

686 amino acids

Sequence
(BLAST)

001: MNSLCGSSVS LKSENNNSRT KVQQPTTPSN DSVMQSKKNN ATQSSGDLDQ TSLTPPSLNL PSLKFDLDGD VEVQSPDSSM WESFFADHNL DGDFMISSPV
101: RTPQASSYNC NYNYAQGMQG QSLSGCSPPR FSSSQIGAFN SNKGKGLSPL HRVFNSPNNQ YMQHVENLSL PAIEFLEDYQ LGYSSSTTNK MCCSDHNNIA
201: SSSECFDLSM SHQIPSSMLD GLALHNSSSR YHRGSVVVDE ESSVHGGGAG GFSQLSEESD IYHQMGSMAS ASLSQALQQE HYQEKQQAQQ LQQQQQQQQQ
301: HQQENLMVPI PIGVEQEQDS GLQLVHLLLA CAEAVAKEEY MLARRYLHHL NRVVTPLGDS MQRVAACFTD SLSVRLNSTL TPKPTTPSKP LTPSNSLEVL
401: KIYQIVYQAC PYVKFAHFTA NQAIFEAFET EERVHVIDLD ILQGYQWPAF MQALAARPAG APFLRITGVG PSIDTVRETG RCLTELAHSL RIPFEFHAVG
501: EQLEDLKPHM LNRRVGEALA VNAVNRLHRV PGNHLGNLLT MLRDQAPSIV TLVEQEASHN GPYFLGRFLE ALHYYSAIFD SLDATFPAES AQRAKVEQYI
601: FAPEIRNIVA CEGPERFERH ERLEKWRKMM EGKGFKGVVL SPNAVTQSKI LLGLYSCEGY RLTEDKGCLL LGWQDRAIVA ASAWRC

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.