CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63032	Soybean	cytosol	94.26	94.63
KRG92263	Soybean	cytosol	65.35	82.71
KRH34544	Soybean	cytosol	77.82	80.53
VIT_11s0016g04630.t01	Wine grape	plastid	70.1	66.54
OQU87235	Sorghum	extracellular	32.48	55.59
Os01t0646300-01	Rice	cytosol	48.12	49.09
TraesCS3A01G233000.1	Wheat	plasma membrane	48.51	48.9
Zm00001d044065_P001	Maize	cytosol	44.55	47.37
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	57.23	47.3
KRH42544	Soybean	cytosol, nucleus, plastid	48.12	47.0
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	48.91	46.69
KRH58636	Soybean	nucleus	48.12	46.46
TraesCS3D01G220100.3	Wheat	cytosol, endoplasmic reticulum, plasma membrane	48.51	45.62
HORVU3Hr1G058100.1	Barley	plastid	48.51	43.52
KRG97933	Soybean	nucleus	49.7	42.98
KRH30942	Soybean	cytosol	49.9	42.35
TraesCS5A01G511900.1	Wheat	cytosol	36.04	41.74
TraesCS4B01G342800.1	Wheat	cytosol	36.04	41.36
Os05t0574900-01	Rice	plasma membrane	39.21	39.6
TraesCS1A01G413800.1	Wheat	cytosol, nucleus, plastid	37.43	39.21
TraesCS4D01G338800.1	Wheat	cytoskeleton, cytosol, peroxisome, plastid	36.63	37.83
Zm00001d009646_P001	Maize	plastid	35.45	37.68
TraesCS1D01G421200.1	Wheat	cytosol	37.43	37.2
TraesCS1B01G443800.1	Wheat	cytosol	36.83	35.98
HORVU1Hr1G090800.1	Barley	mitochondrion	37.03	34.89
KRH29015	Soybean	cytosol	19.41	34.39
KXG23987	Sorghum	cytosol	35.05	33.71
KRH29089	Soybean	mitochondrion	26.93	30.77
KRH34954	Soybean	cytosol	23.96	29.88
KRH24117	Soybean	plastid	25.54	28.99
KRH29080	Soybean	cytosol	25.94	28.79
KRH57194	Soybean	cytosol	29.11	28.77
KRH24106	Soybean	cytosol, nucleus, peroxisome	25.74	28.57
KRH62871	Soybean	cytosol	24.55	27.99
KRH29971	Soybean	cytosol	24.36	27.83
KRH03910	Soybean	cytosol	28.32	27.82
KRH27822	Soybean	nucleus, plastid	25.54	27.27
KRH44884	Soybean	cytosol	23.17	27.02
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	24.75	26.88
KRH13057	Soybean	cytosol	28.91	26.31
KRG91825	Soybean	nucleus	24.16	26.24
KRH19587	Soybean	cytosol	26.53	25.48
KRH24039	Soybean	cytosol	24.16	25.36
KRH06900	Soybean	plastid	34.06	25.07
KRG94590	Soybean	plastid	33.66	24.96
KRH70202	Soybean	cytosol	23.37	24.79
KRH08555	Soybean	cytosol	22.97	24.63
KRH32212	Soybean	cytosol	26.14	24.58
KRH57249	Soybean	plastid	30.3	23.04
KRH03976	Soybean	mitochondrion, nucleus	30.3	22.87
KRH40615	Soybean	nucleus, plastid	29.5	18.1
KRH00551	Soybean	nucleus, plastid	29.7	17.81

Protein Annotations

Gene3D:1.10.10.1290	EntrezGene:100814551	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EMBL:ACUP02003588
InterPro:DELLA_N_sf	EnsemblPlantsGene:GLYMA_06G213100	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009723	GO:GO:0009737	GO:GO:0009791	GO:GO:0009863	GO:GO:0009867	GO:GO:0009938
GO:GO:0009987	GO:GO:0010187	GO:GO:0042538	GO:GO:0043565	GO:GO:2000033	GO:GO:2000377
UniProt:I1KD93	InterPro:IPR005202	InterPro:IPR038088	EnsemblPlants:KRH54840	ProteinID:KRH54840	ProteinID:KRH54840.1
PFAM:PF03514	PFAM:PF12041	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF7	SMART:SM01129
InterPro:TF_DELLA_N	InterPro:TF_GRAS	UniParc:UPI0002262D26	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:+:21483575..21486274

Molecular Weight (calculated)

56291.4 Da

IEP (calculated)

4.837

GRAVY (calculated)

-0.247

Length

505 amino acids

Sequence
(BLAST)

001: MASSSSNGSS SGSKSWDIDG DLAGFGYKVR SSELQHVAEN MERLENVMDI VNSSTNNNIS QLASDTVFYN PSDIGSWVDT LLSEFDQTAS LPYDFSDFLD
101: LDTDQNQNHK PTLVTMEEDS GIRLVHTLMT CADSVQRGDL AFAGSLIENM QGLLAHVNTN IGIGKVAGYF IDALRRRILG QGVFQTLSSS SYPYEDNVLY
201: HHYYEACPYL KFAHFTANQA ILEAFNGHDC VHVIDFNLMQ GLQWPALIQA LALRPGGPPL LRLTGIGPPS SDNRDTLREI GLRLAELARS VNVRFAFRGV
301: AAWRLEDVKP WMLQVNPNEA VAVNSIMQLH RLLASDSDPI GSGIETVLGW IRSLNPKIIS VVEQEANHNQ DRFLERFTEA LHYYSTVFDS LEACPVEPDK
401: ALAEMYLQRE ICNVVSSEGP ARVERHEPLA KWRERLEKAG FKPLHLGSNA YKQASMLLTL FSAEGYSVEE NQGCLTLGWH SRPLIAASAW QAAPMQDRET
501: LRFEQ

Best Arabidopsis Sequence Match ( AT3G03450.1 )
(BLAST)

001: MKRGYGETWD PPPKPLPASR SGEGPSMADK KKADDDNNNS NMDDELLAVL GYKVRSSEMA EVAQKLEQLE MVLSNDDVGS TVLNDSVHYN PSDLSNWVES
101: MLSELNNPAS SDLDTTRSCV DRSEYDLRAI PGLSAFPKEE EVFDEEASSK RIRLGSWCES SDESTRSVVL VDSQETGVRL VHALVACAEA IHQENLNLAD
201: ALVKRVGTLA GSQAGAMGKV ATYFAQALAR RIYRDYTAET DVCAAVNPSF EEVLEMHFYE SCPYLKFAHF TANQAILEAV TTARRVHVID LGLNQGMQWP
301: ALMQALALRP GGPPSFRLTG IGPPQTENSD SLQQLGWKLA QFAQNMGVEF EFKGLAAESL SDLEPEMFET RPESETLVVN SVFELHRLLA RSGSIEKLLN
401: TVKAIKPSIV TVVEQEANHN GIVFLDRFNE ALHYYSSLFD SLEDSYSLPS QDRVMSEVYL GRQILNVVAA EGSDRVERHE TAAQWRIRMK SAGFDPIHLG
501: SSAFKQASML LSLYATGDGY RVEENDGCLM IGWQTRPLIT TSAWKLA

Arabidopsis Description

RGL2RGL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VH73]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.