Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
- cytoskeleton 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G342800.1 | Wheat | cytosol | 83.84 | 93.18 |
| TraesCS5A01G511900.1 | Wheat | cytosol | 81.6 | 91.51 |
| TraesCS1D01G421200.1 | Wheat | cytosol | 85.48 | 82.28 |
| HORVU1Hr1G090800.1 | Barley | mitochondrion | 80.57 | 73.51 |
| Os05t0574900-01 | Rice | plasma membrane | 50.72 | 49.6 |
| KRG92263 | Soybean | cytosol | 38.04 | 46.62 |
| KXG23987 | Sorghum | cytosol | 44.79 | 41.71 |
| TraesCS3D01G220100.3 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 44.79 | 40.78 |
| Zm00001d009646_P001 | Maize | plastid | 39.26 | 40.42 |
| KRH34544 | Soybean | cytosol | 38.04 | 38.11 |
| KRH63032 | Soybean | cytosol | 37.83 | 36.78 |
| KRH54840 | Soybean | cytosol | 37.83 | 36.63 |
| VIT_11s0016g04630.t01 | Wine grape | plastid | 38.04 | 34.96 |
| GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 39.26 | 31.42 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 28.83 | 30.99 |
| TraesCS2D01G534700.1 | Wheat | cytosol | 19.43 | 30.25 |
| TraesCS6D01G055100.1 | Wheat | cytosol | 19.22 | 29.94 |
| TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 18.0 | 28.21 |
| TraesCS6D01G153000.1 | Wheat | cytosol | 22.7 | 28.1 |
| TraesCS7D01G379200.1 | Wheat | cytosol | 24.34 | 28.0 |
| TraesCS4D01G040400.1 | Wheat | cytosol | 34.36 | 26.97 |
| TraesCS2D01G208500.1 | Wheat | cytosol | 23.52 | 25.61 |
| TraesCS3D01G385500.1 | Wheat | cytosol | 25.77 | 24.28 |
| TraesCS3D01G385400.1 | Wheat | cytosol | 25.36 | 23.98 |
| TraesCS5D01G139500.1 | Wheat | mitochondrion | 27.2 | 23.79 |
| TraesCS1D01G303500.1 | Wheat | peroxisome | 23.11 | 23.16 |
| TraesCS2D01G302600.1 | Wheat | cytosol, mitochondrion, nucleus | 22.7 | 22.93 |
| TraesCS4D01G054000.1 | Wheat | cytosol | 25.36 | 22.55 |
| TraesCS5D01G148000.1 | Wheat | plastid | 29.45 | 22.05 |
| TraesCS4D01G127800.2 | Wheat | mitochondrion | 20.86 | 21.47 |
| TraesCS7D01G053600.1 | Wheat | plastid | 27.4 | 21.37 |
| TraesCS4D01G122000.1 | Wheat | plastid | 28.83 | 20.77 |
| TraesCS2D01G095300.1 | Wheat | nucleus | 28.83 | 19.72 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G338800.1 | EnsemblPlantsGene:TraesCS4D01G338800 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF128 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:11.6.2.2 | MapMan:15.5.12 | : |
Description
No Description!
Coordinates
chr4D:+:496695634..496697103
Molecular Weight (calculated)
52380.2 Da
IEP (calculated)
6.230
GRAVY (calculated)
-0.009
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHFSFGWQG KEPAPTASPS GAGATLPLQS VQGTAAATVG ADTAYCLDPA MYAPAVPPTV PPPVAEAAAR RRQEAENIAL YLIHILRKCA ETIEAGDYAA
101: AAGKLAEART MLATSISTTT GIGRVASHFT AALAQRIFPA SPHSSFALDA SPERARELYR QFYDAGPYLK FAHFTANQAI LEAFEGCDRV HVVDLAIKQG
201: MQWPALIQAL SIRPGGPPSV RITGVGSAPA ADEVGLRLAE FARAMNVPFS FQRVTDDSLD QLQPWMFQVL PGEAVAVNSI CQLHRLLVNP DAASTSLPTP
301: IDVVLGWIAS MQPRVFTVVE QEADHNKPGL VTRFDNAMFY YGSVLDSMEA MSVSRGGAIG NGAGADAYVQ REIFNIVCYE GSARTERHEP LAYWCARLWR
401: TGFTHVPLGP SAAYQAAKLA RVFSCTGFRV QEIGGCLSLA WHEHPLFTVS VWSAMPADGA DTAKEHADNH KLKMSIGESS DSHLPDIGA
101: AAGKLAEART MLATSISTTT GIGRVASHFT AALAQRIFPA SPHSSFALDA SPERARELYR QFYDAGPYLK FAHFTANQAI LEAFEGCDRV HVVDLAIKQG
201: MQWPALIQAL SIRPGGPPSV RITGVGSAPA ADEVGLRLAE FARAMNVPFS FQRVTDDSLD QLQPWMFQVL PGEAVAVNSI CQLHRLLVNP DAASTSLPTP
301: IDVVLGWIAS MQPRVFTVVE QEADHNKPGL VTRFDNAMFY YGSVLDSMEA MSVSRGGAIG NGAGADAYVQ REIFNIVCYE GSARTERHEP LAYWCARLWR
401: TGFTHVPLGP SAAYQAAKLA RVFSCTGFRV QEIGGCLSLA WHEHPLFTVS VWSAMPADGA DTAKEHADNH KLKMSIGESS DSHLPDIGA
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.