Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G392400.1 | Wheat | cytosol | 98.27 | 98.27 |
| TraesCS3B01G424600.1 | Wheat | cytosol | 98.07 | 98.07 |
| TraesCS3D01G385400.1 | Wheat | cytosol | 89.6 | 89.94 |
| HORVU3Hr1G088820.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.69 | 79.23 |
| Zm00001d042472_P001 | Maize | cytosol | 80.15 | 77.32 |
| EES01920 | Sorghum | cytosol | 79.77 | 77.09 |
| GSMUA_Achr8P01180_001 | Banana | nucleus | 47.78 | 54.27 |
| VIT_17s0000g10300.t01 | Wine grape | nucleus | 51.06 | 51.06 |
| KRH03910 | Soybean | cytosol | 47.78 | 48.25 |
| PGSC0003DMT400039455 | Potato | cytosol | 49.13 | 47.84 |
| Solyc03g110950.1.1 | Tomato | cytosol | 48.75 | 47.74 |
| KRH57194 | Soybean | cytosol | 46.82 | 47.55 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 27.94 | 31.87 |
| TraesCS2D01G208500.1 | Wheat | cytosol | 26.98 | 31.18 |
| TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 18.5 | 30.77 |
| TraesCS2D01G534700.1 | Wheat | cytosol | 18.5 | 30.57 |
| TraesCS6D01G055100.1 | Wheat | cytosol | 18.11 | 29.94 |
| TraesCS3D01G220100.3 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 29.29 | 28.31 |
| TraesCS1D01G303500.1 | Wheat | peroxisome | 25.63 | 27.25 |
| TraesCS6D01G153000.1 | Wheat | cytosol | 20.42 | 26.84 |
| TraesCS4D01G338800.1 | Wheat | cytoskeleton, cytosol, peroxisome, plastid | 24.28 | 25.77 |
| TraesCS2D01G095300.1 | Wheat | nucleus | 34.68 | 25.17 |
| TraesCS7D01G379200.1 | Wheat | cytosol | 20.42 | 24.94 |
| TraesCS1D01G421200.1 | Wheat | cytosol | 24.28 | 24.8 |
| TraesCS4D01G040400.1 | Wheat | cytosol | 29.48 | 24.56 |
| TraesCS4D01G127800.2 | Wheat | mitochondrion | 22.16 | 24.21 |
| TraesCS7D01G053600.1 | Wheat | plastid | 28.52 | 23.6 |
| TraesCS5D01G139500.1 | Wheat | mitochondrion | 25.24 | 23.43 |
| TraesCS2D01G302600.1 | Wheat | cytosol, mitochondrion, nucleus | 21.77 | 23.35 |
| TraesCS5D01G148000.1 | Wheat | plastid | 27.94 | 22.21 |
| TraesCS4D01G054000.1 | Wheat | cytosol | 23.31 | 22.0 |
| TraesCS4D01G122000.1 | Wheat | plastid | 28.13 | 21.5 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G385500.1 | EnsemblPlantsGene:TraesCS3D01G385500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF24 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | MapMan:26.9.2.3 | : |
Description
No Description!
Coordinates
chr3D:-:501060755..501062314
Molecular Weight (calculated)
56510.2 Da
IEP (calculated)
6.040
GRAVY (calculated)
-0.140
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMLPSSFTT SSSWQSHQDA SSICTNQELD YDHPYYFGIE EVAVDADELE LGLRAHKATR VDYLSSPYQA SWPSAQADLE SSRVRKTKQF RDVLETCKQK
101: VEAMEAMERS SSPVGSGGFE EQGEAVVAVD DVRGGGGGSG ADGMRLVQLL VACAEAVACR DRAQAAALLR ELQVGAPVHG TAFQRVASCF VQGLADRLAL
201: AHPPALGPAS MAFCLPRSSC LDGARGEALA VAYELCPYLR FAHFVANTSI LEAFEGESNV HVVDLGMTMG LNRGHQWRAL LDSLATRACG KPARVRVTGV
301: GARVDTMRAV GRELEAYANE LGITLEFMAV DRTLESLHVD DLGVEADEAV AINSVLELHC VVKESRGALN SVLQTIRKLS PKAFVLVEQD AGHNGPFFLG
401: RFMEALHYYA ALFDALDAAL PRYDARRARV EQFHFGAEIR NVVGCEGAAR VERHERADQW RRRMSRAGFQ SMPFKMAAKA REWLEENAGG SGYTVAEEKG
501: CLVLGWKGKP VIAASCWKC
101: VEAMEAMERS SSPVGSGGFE EQGEAVVAVD DVRGGGGGSG ADGMRLVQLL VACAEAVACR DRAQAAALLR ELQVGAPVHG TAFQRVASCF VQGLADRLAL
201: AHPPALGPAS MAFCLPRSSC LDGARGEALA VAYELCPYLR FAHFVANTSI LEAFEGESNV HVVDLGMTMG LNRGHQWRAL LDSLATRACG KPARVRVTGV
301: GARVDTMRAV GRELEAYANE LGITLEFMAV DRTLESLHVD DLGVEADEAV AINSVLELHC VVKESRGALN SVLQTIRKLS PKAFVLVEQD AGHNGPFFLG
401: RFMEALHYYA ALFDALDAAL PRYDARRARV EQFHFGAEIR NVVGCEGAAR VERHERADQW RRRMSRAGFQ SMPFKMAAKA REWLEENAGG SGYTVAEEKG
501: CLVLGWKGKP VIAASCWKC
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.