Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G382800.1 | Wheat | cytosol | 98.59 | 98.36 |
| TraesCS7B01G285500.1 | Wheat | cytosol | 98.82 | 97.9 |
| HORVU7Hr1G091000.1 | Barley | cytosol | 96.71 | 96.48 |
| Os06t0610350-01 | Rice | cytosol | 84.0 | 80.95 |
| Zm00001d046783_P001 | Maize | mitochondrion | 79.53 | 74.12 |
| OQU76691 | Sorghum | cytosol, extracellular | 80.0 | 72.65 |
| TraesCS6D01G153000.1 | Wheat | cytosol | 59.53 | 64.05 |
| GSMUA_Achr1P09360_001 | Banana | cytosol | 44.24 | 50.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 45.18 | 50.26 |
| GSMUA_Achr1P19470_001 | Banana | nucleus | 44.94 | 49.87 |
| GSMUA_Achr7P16880_001 | Banana | cytosol | 43.53 | 48.81 |
| VIT_19s0015g01930.t01 | Wine grape | cytosol | 46.12 | 47.46 |
| Solyc07g066250.1.1 | Tomato | nucleus | 42.12 | 41.82 |
| PGSC0003DMT400057265 | Potato | nucleus, plastid | 42.35 | 41.76 |
| CDY50028 | Canola | nucleus, plastid | 39.53 | 40.29 |
| CDY54362 | Canola | plastid | 39.76 | 40.14 |
| AT1G55580.1 | Thale cress | plastid | 40.24 | 38.43 |
| Bra038002.1-P | Field mustard | nucleus, plastid | 39.76 | 38.15 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 31.53 | 29.45 |
| TraesCS6D01G055100.1 | Wheat | cytosol | 20.71 | 28.03 |
| TraesCS2D01G208500.1 | Wheat | cytosol | 28.94 | 27.39 |
| TraesCS2D01G534700.1 | Wheat | cytosol | 20.0 | 27.07 |
| TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 18.59 | 25.32 |
| TraesCS1D01G303500.1 | Wheat | peroxisome | 28.94 | 25.2 |
| TraesCS4D01G338800.1 | Wheat | cytoskeleton, cytosol, peroxisome, plastid | 28.0 | 24.34 |
| TraesCS3D01G220100.3 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 29.88 | 23.65 |
| TraesCS2D01G302600.1 | Wheat | cytosol, mitochondrion, nucleus | 26.59 | 23.35 |
| TraesCS1D01G421200.1 | Wheat | cytosol | 27.76 | 23.23 |
| TraesCS4D01G054000.1 | Wheat | cytosol | 29.18 | 22.55 |
| TraesCS3D01G385500.1 | Wheat | cytosol | 24.94 | 20.42 |
| TraesCS5D01G148000.1 | Wheat | plastid | 31.29 | 20.37 |
| TraesCS3D01G385400.1 | Wheat | cytosol | 24.47 | 20.12 |
| TraesCS4D01G040400.1 | Wheat | cytosol | 29.18 | 19.9 |
| TraesCS4D01G122000.1 | Wheat | plastid | 31.76 | 19.88 |
| TraesCS5D01G139500.1 | Wheat | mitochondrion | 25.65 | 19.5 |
| TraesCS7D01G053600.1 | Wheat | plastid | 28.0 | 18.98 |
| TraesCS4D01G127800.2 | Wheat | mitochondrion | 20.94 | 18.74 |
| TraesCS2D01G095300.1 | Wheat | nucleus | 31.06 | 18.46 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G379200.1 | EnsemblPlantsGene:TraesCS7D01G379200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0010014 | GO:GO:0010223 | InterPro:IPR005202 |
| InterPro:Scarecrow-like_18/MOC1 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF2 | PFAM:PF03514 | PFscan:PS50985 |
| SEG:seg | MapMan:15.5.12 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:491246692..491248112
Molecular Weight (calculated)
44974.4 Da
IEP (calculated)
7.003
GRAVY (calculated)
-0.014
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MISSLHSSSS SDTDNNSNAD LRNSSGEGGG DAALLGGGGR ALAAAPSTRD LVLACADLLQ RGDLAAARRA AEILLSAASP RGDATDRLAY HFARALVLRV
101: DSKAGLPFSP RPPAGTAPAP SGAYLAFNQI APFLRFAHLT ANQAILEAVE GSRRVHILDL DAAHGVQWPP LLQAIAERAD PALGPPEVRI TGAGADRDTL
201: LRTGNRLRAF ARSIHLPFHF TPLLLSCAAS THHVAGTSTT PSTAVTSLEL HPDETLAVNC VLFLHKLGGQ DELAAFLKWV KAMAPAVVTV AEREASGGEI
301: DPIDELPRRV GVAMDHYSAV FEALEATVPP GSRERLAVEQ EVLGREIEAA VGGTGGRWWR GLERWATAAR GTGFAARPLS AFAVSQARLL LRLHYPSEGY
401: LVQESRGACF LGWQTRPLLS VSAWQ
101: DSKAGLPFSP RPPAGTAPAP SGAYLAFNQI APFLRFAHLT ANQAILEAVE GSRRVHILDL DAAHGVQWPP LLQAIAERAD PALGPPEVRI TGAGADRDTL
201: LRTGNRLRAF ARSIHLPFHF TPLLLSCAAS THHVAGTSTT PSTAVTSLEL HPDETLAVNC VLFLHKLGGQ DELAAFLKWV KAMAPAVVTV AEREASGGEI
301: DPIDELPRRV GVAMDHYSAV FEALEATVPP GSRERLAVEQ EVLGREIEAA VGGTGGRWWR GLERWATAAR GTGFAARPLS AFAVSQARLL LRLHYPSEGY
401: LVQESRGACF LGWQTRPLLS VSAWQ
001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
Arabidopsis Description
SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.