Factsheet for Zm00001d046783_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76691	Sorghum	cytosol, extracellular	87.94	85.68
TraesCS7D01G379200.1	Wheat	cytosol	74.12	79.53
TraesCS7A01G382800.1	Wheat	cytosol	74.12	79.34
HORVU7Hr1G091000.1	Barley	cytosol	74.12	79.34
TraesCS7B01G285500.1	Wheat	cytosol	73.9	78.55
Os06t0610350-01	Rice	cytosol	75.44	78.0
Zm00001d015815_P001	Maize	cytosol	57.02	62.5
GSMUA_AchrUn_...	Banana	cytosol	41.45	49.48
GSMUA_Achr1P19470_001	Banana	nucleus	41.23	49.09
GSMUA_Achr1P09360_001	Banana	cytosol	39.69	49.05
GSMUA_Achr7P16880_001	Banana	cytosol	40.13	48.28
VIT_19s0015g01930.t01	Wine grape	cytosol	42.32	46.73
Solyc07g066250.1.1	Tomato	nucleus	39.04	41.59
PGSC0003DMT400057265	Potato	nucleus, plastid	39.25	41.53
CDY50028	Canola	nucleus, plastid	36.84	40.29
CDY54362	Canola	plastid	36.84	39.91
Bra038002.1-P	Field mustard	nucleus, plastid	36.84	37.92
AT1G55580.1	Thale cress	plastid	36.84	37.75
Zm00001d042127_P001	Maize	plastid	28.29	28.86
Zm00001d021826_P001	Maize	cytosol	27.19	27.43
Zm00001d011881_P001	Maize	cytosol	26.75	27.17
Zm00001d044065_P001	Maize	cytosol	26.1	25.05
Zm00001d038518_P001	Maize	cytosol	25.88	23.74
Zm00001d033834_P001	Maize	cytosol, plastid	28.07	23.23
Zm00001d003657_P001	Maize	cytosol, mitochondrion, nucleus	25.0	22.89
Zm00001d013385_P001	Maize	cytosol, plastid	28.07	22.5
Zm00001d052463_P001	Maize	cytosol	25.22	21.99
Zm00001d025133_P001	Maize	cytosol	23.68	21.86
Zm00001d023248_P001	Maize	cytosol	23.03	20.75
Zm00001d037901_P001	Maize	cytosol, peroxisome, plastid	20.61	20.35
Zm00001d009646_P001	Maize	plastid	21.05	20.21
Zm00001d013465_P001	Maize	cytosol	27.63	20.16
Zm00001d052464_P001	Maize	cytosol, plasma membrane, plastid	21.49	20.12
Zm00001d033680_P001	Maize	nucleus	27.63	20.0
Zm00001d052380_P001	Maize	plastid	27.63	18.86
Zm00001d005029_P001	Maize	plastid	27.63	18.58
Zm00001d042472_P001	Maize	cytosol	21.71	18.4
Zm00001d045507_P001	Maize	plastid	24.78	18.34
Zm00001d049249_P001	Maize	plastid	28.29	16.65
Zm00001d023247_P001	Maize	plastid	19.52	15.89

Protein Annotations

MapMan:15.5.12	UniProt:A0A1D6P4Z1	ProteinID:AQL05018.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010014	GO:GO:0010223
InterPro:IPR005202	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF2	InterPro:Scarecrow-like_18/MOC1
InterPro:TF_GRAS	UniParc:UPI000845188E	EnsemblPlantsGene:Zm00001d046783	EnsemblPlants:Zm00001d046783_P001	EnsemblPlants:Zm00001d046783_T001	SEG:seg

Description

GRAS-transcription factor 70Scarecrow-like protein 18

Coordinates

chr9:-:105852291..105853661

Molecular Weight (calculated)

48723.0 Da

IEP (calculated)

9.539

GRAVY (calculated)

-0.082

Length

456 amino acids

Sequence
(BLAST)

001: MLLACHHRRL RPPPPLKKKK LGLRRPTTDE AMLSSLHHHS SSSSDTDNNN GNNKNGSSNN SDVLAAAAVP SARDLVLACA DLLQRGDLQA ARRAVGVLLS
101: AASPRADAAD RLAYHFARAL ALRADARAAA TGLVAAAAAR PASSAAYLAF NQIAPFLRFA HLTANQAILD AVEGARRIHI LDLDAAHGVQ WPPLLQAIAE
201: RADPAAGPPE VRITGAGADR DTLLRTGSRL RAFARSIQLP FHFTPLLLSC AATHQQQVVT SASTTTNTTT SSAATTSQLE LHPDETLAVN CVMFLHKLGG
301: HDELAAFLKW VKAMAPAVVT IAERETIGGG FDRIDDLPQR SAVAMDHYSA VFEALEATVP PGSRERLAVE HEVLGREIDA ALGPSGGRWW RGLERWGAAA
401: RGAGFAARPL SAFAVSQARL LLRLHYPSEG YLVQEARGAC FLGWQTRPLL SVSSWQ

Best Arabidopsis Sequence Match ( AT1G55580.1 )
(BLAST)

001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK

Arabidopsis Description

SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.