Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038002.1-P | Field mustard | nucleus, plastid | 87.87 | 88.26 |
| CDY50028 | Canola | nucleus, plastid | 82.7 | 88.25 |
| CDY54362 | Canola | plastid | 83.37 | 88.12 |
| VIT_19s0015g01930.t01 | Wine grape | cytosol | 51.46 | 55.45 |
| Solyc07g066250.1.1 | Tomato | nucleus | 49.89 | 51.87 |
| PGSC0003DMT400057265 | Potato | nucleus, plastid | 49.66 | 51.28 |
| GSMUA_Achr1P19470_001 | Banana | nucleus | 42.02 | 48.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.35 | 48.17 |
| GSMUA_Achr1P09360_001 | Banana | cytosol | 39.1 | 47.15 |
| GSMUA_Achr7P16880_001 | Banana | cytosol | 38.2 | 44.85 |
| TraesCS7D01G379200.1 | Wheat | cytosol | 38.43 | 40.24 |
| TraesCS7A01G382800.1 | Wheat | cytosol | 38.43 | 40.14 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 35.28 | 40.05 |
| HORVU7Hr1G091000.1 | Barley | cytosol | 38.2 | 39.91 |
| TraesCS7B01G285500.1 | Wheat | cytosol | 38.43 | 39.86 |
| TraesCS6D01G153000.1 | Wheat | cytosol | 35.28 | 39.75 |
| TraesCS6B01G191800.1 | Wheat | cytosol | 35.06 | 39.49 |
| KXG29713 | Sorghum | cytosol | 35.06 | 39.29 |
| Os06t0610350-01 | Rice | cytosol | 37.53 | 37.87 |
| Zm00001d046783_P001 | Maize | mitochondrion | 37.75 | 36.84 |
| OQU76691 | Sorghum | cytosol, extracellular | 38.43 | 36.54 |
| Zm00001d015815_P001 | Maize | cytosol | 33.93 | 36.3 |
| HORVU6Hr1G033280.1 | Barley | cytosol | 35.28 | 35.2 |
| Os02t0197300-00 | Rice | cytosol | 35.06 | 34.98 |
| AT5G41920.1 | Thale cress | cytosol | 28.54 | 31.36 |
| AT1G50420.1 | Thale cress | cytosol | 26.97 | 24.9 |
| AT1G66350.1 | Thale cress | cytosol | 27.87 | 24.27 |
| AT5G17490.1 | Thale cress | cytosol | 27.87 | 23.71 |
| AT3G03450.1 | Thale cress | nucleus | 28.99 | 23.58 |
| AT3G50650.1 | Thale cress | cytosol | 28.54 | 23.43 |
| AT1G14920.1 | Thale cress | nucleus | 26.97 | 22.51 |
| AT5G66770.1 | Thale cress | cytosol | 28.76 | 21.92 |
| AT3G54220.1 | Thale cress | nucleus, plastid | 30.79 | 20.98 |
| AT2G01570.1 | Thale cress | mitochondrion, nucleus | 26.74 | 20.27 |
| AT1G63100.2 | Thale cress | plastid | 28.99 | 19.6 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:842007 | UniProt:A0A178WEV4 | ProteinID:AAF79493.1 | ProteinID:ABR08911.1 | ProteinID:ABR08912.1 |
| ProteinID:ABR08913.1 | ProteinID:ABR08914.1 | ProteinID:ABR08915.1 | ProteinID:ABR08916.1 | ProteinID:ABR08917.1 | ProteinID:ABR08918.1 |
| ProteinID:ABR08919.1 | ProteinID:ABR08920.1 | ProteinID:ABR08921.1 | ProteinID:ABR08922.1 | ProteinID:ABR08923.1 | ProteinID:ABR08924.1 |
| ProteinID:ABR08925.1 | ProteinID:ABR08926.1 | ProteinID:ABR08927.1 | ProteinID:ABR08928.1 | ProteinID:ABR08929.1 | ProteinID:ABR08930.1 |
| ProteinID:ABR08931.1 | ProteinID:ABR08932.1 | ProteinID:ABR08933.1 | ProteinID:ABR08934.1 | ProteinID:AEE33268.1 | ArrayExpress:AT1G55580 |
| EnsemblPlantsGene:AT1G55580 | RefSeq:AT1G55580 | TAIR:AT1G55580 | RefSeq:AT1G55580-TAIR-G | EnsemblPlants:AT1G55580.1 | TAIR:AT1G55580.1 |
| EMBL:AY196482 | EMBL:BT026519 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010223 | GO:GO:0043565 | GO:GO:0090506 | InterPro:IPR005202 |
| Symbol:LAS | RefSeq:NP_175954.1 | ProteinID:OAP16776.1 | PFAM:PF03514 | PO:PO:0000037 | PO:PO:0001078 |
| PO:PO:0004507 | PO:PO:0004726 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009023 | PO:PO:0009046 | PO:PO:0020100 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF2 |
| UniProt:Q9ZWC5 | InterPro:Scarecrow-like_18/MOC1 | InterPro:TF_GRAS | UniParc:UPI00000A351C | SEG:seg | : |
Description
SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
Coordinates
chr1:+:20763844..20765823
Molecular Weight (calculated)
50012.2 Da
IEP (calculated)
6.565
GRAVY (calculated)
-0.228
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.