Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G01570.1 | Thale cress | mitochondrion, nucleus | 81.61 | 74.11 |
| KRH42544 | Soybean | cytosol, nucleus, plastid | 68.11 | 70.21 |
| KRH58636 | Soybean | nucleus | 68.67 | 69.98 |
| VIT_01s0011g05260.t01 | Wine grape | cytosol | 70.17 | 63.39 |
| AT1G66350.1 | Thale cress | cytosol | 58.91 | 61.45 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 36.59 | 59.82 |
| AT5G17490.1 | Thale cress | cytosol | 56.66 | 57.74 |
| AT3G03450.1 | Thale cress | nucleus | 59.1 | 57.59 |
| GSMUA_Achr8P18250_001 | Banana | cytosol | 51.41 | 57.2 |
| GSMUA_Achr10P... | Banana | cytosol | 51.22 | 57.11 |
| TraesCS4D01G040400.1 | Wheat | cytosol | 60.6 | 51.85 |
| HORVU4Hr1G006930.1 | Barley | nucleus | 60.04 | 51.78 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 60.23 | 51.77 |
| TraesCS4B01G043100.1 | Wheat | cytosol | 60.23 | 51.69 |
| Os03t0707600-01 | Rice | nucleus | 60.41 | 51.52 |
| Zm00001d013465_P001 | Maize | cytosol | 60.23 | 51.36 |
| EER93592 | Sorghum | cytosol | 60.41 | 51.36 |
| Zm00001d033680_P001 | Maize | nucleus | 60.6 | 51.27 |
| GSMUA_Achr1P21300_001 | Banana | nucleus | 49.16 | 50.78 |
| AT5G41920.1 | Thale cress | cytosol | 24.2 | 31.85 |
| AT1G50420.1 | Thale cress | cytosol | 26.45 | 29.25 |
| AT1G55580.1 | Thale cress | plastid | 22.51 | 26.97 |
| AT3G54220.1 | Thale cress | nucleus, plastid | 27.95 | 22.82 |
| AT5G66770.1 | Thale cress | cytosol | 24.58 | 22.43 |
| AT1G63100.2 | Thale cress | plastid | 27.39 | 22.19 |
| AT3G50650.1 | Thale cress | cytosol | 22.51 | 22.14 |
Protein Annotations
| Gene3D:1.10.10.1290 | MapMan:11.6.2.2 | MapMan:15.5.12 | MapMan:26.6.2.1 | PDB:2ZSH | PDB:2ZSI |
| EntrezGene:838057 | ProteinID:AAF79228.1 | ProteinID:AEE29242.1 | ArrayExpress:AT1G14920 | EnsemblPlantsGene:AT1G14920 | RefSeq:AT1G14920 |
| TAIR:AT1G14920 | RefSeq:AT1G14920-TAIR-G | EnsemblPlants:AT1G14920.1 | TAIR:AT1G14920.1 | EMBL:AY058194 | EMBL:AY142002 |
| ProteinID:CAA75492.1 | ncoils:Coil | InterPro:DELLA_N_sf | Symbol:GAI | GO:GO:0000003 | GO:GO:0000989 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003712 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006808 | GO:GO:0006810 | GO:GO:0007049 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007267 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009740 | GO:GO:0009938 | GO:GO:0009987 |
| GO:GO:0010218 | GO:GO:0010233 | GO:GO:0010628 | GO:GO:0010629 | GO:GO:0030154 | GO:GO:0033206 |
| GO:GO:0040007 | GO:GO:0043565 | GO:GO:1900033 | GO:GO:1905614 | GO:GO:1905622 | InterPro:IPR005202 |
| InterPro:IPR038088 | RefSeq:NP_172945.1 | PFAM:PF03514 | PFAM:PF12041 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PO:PO:0025374 | PFscan:PS50985 |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF47 | UniProt:Q9LQT8 | SMART:SM01129 | InterPro:TF_DELLA | InterPro:TF_DELLA_N |
| InterPro:TF_GRAS | UniParc:UPI000009E27F | EMBL:Y11337 | SEG:seg | : | : |
Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
Coordinates
chr1:+:5148982..5151415
Molecular Weight (calculated)
58929.9 Da
IEP (calculated)
5.410
GRAVY (calculated)
-0.224
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.