Factsheet for AT3G03450.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031991.1-P	Field mustard	cytosol, nucleus, plastid	75.14	81.39
CDY50707	Canola	cytosol, nucleus, plastid	58.14	76.44
CDY43122	Canola	nucleus	58.14	76.26
AT5G17490.1	Thale cress	cytosol	67.64	70.75
AT1G66350.1	Thale cress	cytosol	61.43	65.75
VIT_14s0006g00640.t01	Wine grape	cytosol	63.44	60.98
KRG97933	Soybean	nucleus	65.08	60.96
KRH30942	Soybean	cytosol	65.63	60.34
AT1G14920.1	Thale cress	nucleus	57.59	59.1
Solyc11g011260.1.1	Tomato	nucleus	61.61	57.31
PGSC0003DMT400040589	Potato	nucleus	61.43	57.14
AT2G01570.1	Thale cress	mitochondrion, nucleus	59.96	55.88
AT5G41920.1	Thale cress	cytosol	23.95	32.35
AT1G55580.1	Thale cress	plastid	23.58	28.99
AT1G50420.1	Thale cress	cytosol	25.23	28.63
AT3G50650.1	Thale cress	cytosol	23.03	23.25
AT5G66770.1	Thale cress	cytosol	24.5	22.95
AT3G54220.1	Thale cress	nucleus, plastid	27.06	22.66
AT1G63100.2	Thale cress	plastid	25.41	21.12

Protein Annotations

Gene3D:1.10.10.1290	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EntrezGene:821251	UniProt:A0A178VH73
ProteinID:AAF01590.1	ProteinID:AEE73945.1	EMBL:AK118009	ArrayExpress:AT3G03450	EnsemblPlantsGene:AT3G03450	RefSeq:AT3G03450
TAIR:AT3G03450	RefSeq:AT3G03450-TAIR-G	EnsemblPlants:AT3G03450.1	TAIR:AT3G03450.1	InterPro:DELLA_N_sf	GO:GO:0000003
GO:GO:0000989	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0003712
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009737	GO:GO:0009739	GO:GO:0009740	GO:GO:0009791	GO:GO:0009908	GO:GO:0009938
GO:GO:0009987	GO:GO:0010187	GO:GO:0030154	GO:GO:0043565	InterPro:IPR005202	InterPro:IPR038088
RefSeq:NP_186995.1	ProteinID:OAP05206.1	PFAM:PF03514	PFAM:PF12041	PO:PO:0000013	PO:PO:0000037
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0009089	PO:PO:0019018	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PO:PO:0025374	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF47	UniProt:Q8GXW1	Symbol:RGL2	SMART:SM01129	InterPro:TF_DELLA	InterPro:TF_DELLA_N
InterPro:TF_GRAS	UniParc:UPI000009DBD5	SEG:seg	:	:	:

Description

RGL2RGL2 [Source:UniProtKB/TrEMBL;Acc:A0A178VH73]

Coordinates

chr3:-:819337..821652

Molecular Weight (calculated)

60497.2 Da

IEP (calculated)

4.554

GRAVY (calculated)

-0.310

Length

547 amino acids

Sequence
(BLAST)

001: MKRGYGETWD PPPKPLPASR SGEGPSMADK KKADDDNNNS NMDDELLAVL GYKVRSSEMA EVAQKLEQLE MVLSNDDVGS TVLNDSVHYN PSDLSNWVES
101: MLSELNNPAS SDLDTTRSCV DRSEYDLRAI PGLSAFPKEE EVFDEEASSK RIRLGSWCES SDESTRSVVL VDSQETGVRL VHALVACAEA IHQENLNLAD
201: ALVKRVGTLA GSQAGAMGKV ATYFAQALAR RIYRDYTAET DVCAAVNPSF EEVLEMHFYE SCPYLKFAHF TANQAILEAV TTARRVHVID LGLNQGMQWP
301: ALMQALALRP GGPPSFRLTG IGPPQTENSD SLQQLGWKLA QFAQNMGVEF EFKGLAAESL SDLEPEMFET RPESETLVVN SVFELHRLLA RSGSIEKLLN
401: TVKAIKPSIV TVVEQEANHN GIVFLDRFNE ALHYYSSLFD SLEDSYSLPS QDRVMSEVYL GRQILNVVAA EGSDRVERHE TAAQWRIRMK SAGFDPIHLG
501: SSAFKQASML LSLYATGDGY RVEENDGCLM IGWQTRPLIT TSAWKLA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.