Factsheet for AT5G17490.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013973.1-P	Field mustard	cytosol	83.94	83.62
CDY38434	Canola	cytosol	81.26	83.33
CDY16915	Canola	cytosol, nucleus, plastid	83.56	83.24
AT3G03450.1	Thale cress	nucleus	70.75	67.64
AT1G66350.1	Thale cress	cytosol	61.57	63.01
VIT_14s0006g00640.t01	Wine grape	cytosol	61.76	56.77
AT1G14920.1	Thale cress	nucleus	57.74	56.66
KRG97933	Soybean	nucleus	62.14	55.65
KRH30942	Soybean	cytosol	62.33	54.79
Solyc11g011260.1.1	Tomato	nucleus	60.8	54.08
PGSC0003DMT400040589	Potato	nucleus	60.61	53.91
AT2G01570.1	Thale cress	mitochondrion, nucleus	59.08	52.64
AT5G41920.1	Thale cress	cytosol	23.9	30.86
AT1G50420.1	Thale cress	cytosol	26.39	28.63
AT1G55580.1	Thale cress	plastid	23.71	27.87
AT3G50650.1	Thale cress	cytosol	23.71	22.88
AT5G66770.1	Thale cress	cytosol	25.05	22.43
AT3G54220.1	Thale cress	nucleus, plastid	27.72	22.21
AT1G63100.2	Thale cress	plastid	24.67	19.6

Protein Annotations

Gene3D:1.10.10.1290	MapMan:11.6.2.2	MapMan:15.5.12	MapMan:26.6.2.1	EntrezGene:831615	ProteinID:AED92433.1
EMBL:AK117226	ArrayExpress:AT5G17490	EnsemblPlantsGene:AT5G17490	RefSeq:AT5G17490	TAIR:AT5G17490	RefSeq:AT5G17490-TAIR-G
EnsemblPlants:AT5G17490.1	TAIR:AT5G17490.1	EMBL:BT005905	ProteinID:CAC01893.1	InterPro:DELLA_N_sf	GO:GO:0000003
GO:GO:0000989	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0003712
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009719
GO:GO:0009723	GO:GO:0009737	GO:GO:0009739	GO:GO:0009740	GO:GO:0009791	GO:GO:0009863
GO:GO:0009867	GO:GO:0009938	GO:GO:0009987	GO:GO:0010187	GO:GO:0042538	GO:GO:0043565
GO:GO:2000033	GO:GO:2000377	InterPro:IPR005202	InterPro:IPR038088	RefSeq:NP_197251.1	PFAM:PF03514
PFAM:PF12041	PO:PO:0000293	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009009	PO:PO:0009030	PO:PO:0009032	PO:PO:0009049	PO:PO:0025022	PO:PO:0025281
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF47	UniProt:Q9LF53	Symbol:RGL3	SMART:SM01129
InterPro:TF_DELLA	InterPro:TF_DELLA_N	InterPro:TF_GRAS	UniParc:UPI0000060D9F	SEG:seg	:

Description

RGL3DELLA protein RGL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF53]

Coordinates

chr5:-:5763989..5766246

Molecular Weight (calculated)

57329.8 Da

IEP (calculated)

4.495

GRAVY (calculated)

-0.185

Length

523 amino acids

Sequence
(BLAST)

001: MKRSHQETSV EEEAPSMVEK LENGCGGGGD DNMDEFLAVL GYKVRSSDMA DVAQKLEQLE MVLSNDIASS SNAFNDTVHY NPSDLSGWAQ SMLSDLNYYP
101: DLDPNRICDL RPITDDDECC SSNSNSNKRI RLGPWCDSVT SESTRSVVLI EETGVRLVQA LVACAEAVQL ENLSLADALV KRVGLLAASQ AGAMGKVATY
201: FAEALARRIY RIHPSAAAID PSFEEILQMN FYDSCPYLKF AHFTANQAIL EAVTTSRVVH VIDLGLNQGM QWPALMQALA LRPGGPPSFR LTGVGNPSNR
301: EGIQELGWKL AQLAQAIGVE FKFNGLTTER LSDLEPDMFE TRTESETLVV NSVFELHPVL SQPGSIEKLL ATVKAVKPGL VTVVEQEANH NGDVFLDRFN
401: EALHYYSSLF DSLEDGVVIP SQDRVMSEVY LGRQILNLVA TEGSDRIERH ETLAQWRKRM GSAGFDPVNL GSDAFKQASL LLALSGGGDG YRVEENDGSL
501: MLAWQTKPLI AASAWKLAAE LRR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.