Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45059 | Canola | cytosol | 58.71 | 93.09 |
| Bra014251.1-P | Field mustard | cytosol | 85.68 | 92.81 |
| CDY03601 | Canola | cytosol | 85.06 | 91.31 |
| CDY68881 | Canola | cytosol | 46.06 | 90.98 |
| Bra018848.1-P | Field mustard | cytosol | 81.33 | 89.09 |
| CDY22795 | Canola | cytosol, plastid | 80.71 | 87.61 |
| VIT_06s0009g02390.t01 | Wine grape | cytosol | 69.92 | 71.1 |
| Solyc12g099900.1.1 | Tomato | nucleus | 68.46 | 70.51 |
| PGSC0003DMT400011839 | Potato | cytosol | 68.05 | 70.09 |
| PGSC0003DMT400058477 | Potato | cytosol | 65.56 | 66.95 |
| KRH29080 | Soybean | cytosol | 62.66 | 66.37 |
| Solyc01g008910.2.1 | Tomato | cytosol | 65.15 | 65.97 |
| KRH24106 | Soybean | cytosol, nucleus, peroxisome | 61.83 | 65.49 |
| KRH77666 | Soybean | endoplasmic reticulum, nucleus, peroxisome, plastid | 61.62 | 63.87 |
| KRH27822 | Soybean | nucleus, plastid | 61.41 | 62.58 |
| HORVU3Hr1G106260.1 | Barley | cytosol | 23.24 | 62.57 |
| GSMUA_Achr8P09690_001 | Banana | cytosol | 55.81 | 60.31 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 56.22 | 57.29 |
| Os01t0948200-00 | Rice | cytosol | 51.24 | 55.88 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 50.83 | 54.81 |
| TraesCS3B01G535100.1 | Wheat | cytosol | 51.24 | 54.53 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 50.83 | 53.85 |
| Zm00001d042127_P001 | Maize | plastid | 49.59 | 53.47 |
| Zm00001d011881_P001 | Maize | cytosol | 48.76 | 52.34 |
| EES02045 | Sorghum | cytosol, plastid | 49.59 | 52.07 |
| Os06t0211500-00 | Rice | cytosol | 18.05 | 45.55 |
| CDY37137 | Canola | plastid | 81.54 | 41.2 |
| Os12t0138100-00 | Rice | cytosol | 40.04 | 39.23 |
| HORVU2Hr1G113480.1 | Barley | cytosol | 25.52 | 39.05 |
| HORVU2Hr1G113490.1 | Barley | cytosol | 25.52 | 39.05 |
| Os11t0141500-00 | Rice | cytosol | 39.83 | 39.02 |
| Zm00001d023248_P001 | Maize | cytosol | 40.04 | 38.14 |
| TraesCS2D01G534700.1 | Wheat | cytosol | 24.48 | 37.58 |
| TraesCS6D01G055100.1 | Wheat | cytosol | 24.07 | 36.94 |
| TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 23.65 | 36.54 |
| EES16518 | Sorghum | cytosol | 33.82 | 36.22 |
| TraesCS5B01G133800.1 | Wheat | mitochondrion | 41.08 | 35.87 |
| HORVU5Hr1G043310.1 | Barley | cytosol | 40.66 | 35.64 |
| TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 10.79 | 35.62 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 40.66 | 35.32 |
| TraesCS5D01G139500.1 | Wheat | mitochondrion | 40.87 | 35.24 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 31.12 | 34.88 |
| EES09233 | Sorghum | cytosol | 33.4 | 33.06 |
| KXG22822 | Sorghum | mitochondrion | 39.42 | 32.93 |
| Os12t0138200-00 | Rice | cytosol | 34.02 | 32.16 |
| HORVU4Hr1G026010.3 | Barley | cytosol | 29.67 | 32.06 |
| Os11t0141700-00 | Rice | cytosol | 33.4 | 31.82 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 29.25 | 31.61 |
| HORVU2Hr1G113360.1 | Barley | cytosol | 31.12 | 31.58 |
| OQU77884 | Sorghum | plasma membrane | 29.46 | 31.21 |
| TraesCS2B01G562400.1 | Wheat | cytosol | 30.29 | 30.8 |
| Zm00001d052463_P001 | Maize | cytosol | 33.4 | 30.78 |
| TraesCS4D01G127800.2 | Wheat | mitochondrion | 29.46 | 29.89 |
| Zm00001d037901_P001 | Maize | cytosol, peroxisome, plastid | 28.63 | 29.87 |
| TraesCSU01G014000.1 | Wheat | cytosol | 18.05 | 29.59 |
| AT5G41920.1 | Thale cress | cytosol | 24.69 | 29.38 |
| Zm00001d052464_P001 | Maize | cytosol, plasma membrane, plastid | 29.67 | 29.36 |
| OQU77885 | Sorghum | cytosol | 28.22 | 28.22 |
| AT1G66350.1 | Thale cress | cytosol | 29.67 | 27.98 |
| AT1G55580.1 | Thale cress | plastid | 24.9 | 26.97 |
| AT1G14920.1 | Thale cress | nucleus | 29.25 | 26.45 |
| Zm00001d023247_P001 | Maize | plastid | 30.71 | 26.43 |
| AT5G17490.1 | Thale cress | cytosol | 28.63 | 26.39 |
| AT3G03450.1 | Thale cress | nucleus | 28.63 | 25.23 |
| Os05t0378200-00 | Rice | cytosol | 27.39 | 23.96 |
| GSMUA_Achr11P... | Banana | cytosol | 54.77 | 23.96 |
| AT2G01570.1 | Thale cress | mitochondrion, nucleus | 28.84 | 23.68 |
| AT5G66770.1 | Thale cress | cytosol | 26.56 | 21.92 |
| AT1G63100.2 | Thale cress | plastid | 29.05 | 21.28 |
| AT3G54220.1 | Thale cress | nucleus, plastid | 28.63 | 21.13 |
| Os05t0378500-00 | Rice | plastid | 24.27 | 20.89 |
| AT3G50650.1 | Thale cress | cytosol | 23.44 | 20.85 |
| Os12t0138166-00 | Rice | endoplasmic reticulum, extracellular | 2.07 | 2.83 |
| Os11t0141550-01 | Rice | cytosol | 0.21 | 0.78 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:841464 | UniProt:A0A178WJ79 | ProteinID:AAF87889.1 | ProteinID:AEE32546.1 | EMBL:AF036301 |
| ArrayExpress:AT1G50420 | EnsemblPlantsGene:AT1G50420 | RefSeq:AT1G50420 | TAIR:AT1G50420 | RefSeq:AT1G50420-TAIR-G | EnsemblPlants:AT1G50420.1 |
| TAIR:AT1G50420.1 | EMBL:AY056154 | EMBL:AY091260 | GO:GO:0000989 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003712 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009739 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR005202 | RefSeq:NP_175459.1 | ProteinID:OAP17152.1 | PFAM:PF03514 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006036 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF13 | UniProt:Q9LPR8 | Symbol:SCL3 | InterPro:Scarecrow-like_3 |
| InterPro:TF_GRAS | UniParc:UPI00000A88A6 | : | : | : | : |
Description
SCL3Scarecrow-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPR8]
Coordinates
chr1:-:18677694..18680300
Molecular Weight (calculated)
54155.8 Da
IEP (calculated)
6.396
GRAVY (calculated)
-0.267
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.