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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
  • plastid 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr6P09070_001
GSMUA_Achr6P22070_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G50420.1 GSMUA_Achr10P... AT4G22220.1 21798944
AT1G50420.1 GSMUA_Achr6P09070_001 AT4G22220.1 21798944
AT1G50420.1 GSMUA_Achr6P22070_001 AT4G22220.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P09690_001 Banana cytosol 83.3 88.34
HORVU3Hr1G106260.1 Barley cytosol 25.37 67.04
Os01t0948200-00 Rice cytosol 61.1 65.38
TraesCS3A01G487500.1 Wheat cytosol, plastid 60.04 63.53
Zm00001d042127_P001 Maize plastid 59.41 62.86
TraesCS3D01G482600.1 Wheat cytosol 60.47 62.86
CDY68881 Canola cytosol 32.14 62.3
TraesCS3B01G535100.1 Wheat cytosol 59.62 62.25
PGSC0003DMT400011839 Potato cytosol 61.52 62.18
Solyc12g099900.1.1 Tomato nucleus 61.31 61.97
CDY45059 Canola cytosol 39.75 61.84
Zm00001d011881_P001 Maize cytosol 58.56 61.69
VIT_13s0019g01220.t01 Wine grape cytosol 62.16 61.51
EES02045 Sorghum cytosol, plastid 59.2 61.0
VIT_06s0009g02390.t01 Wine grape cytosol 60.68 60.55
KRH29080 Soybean cytosol 57.93 60.22
KRH24106 Soybean cytosol, nucleus, peroxisome 57.29 59.56
Bra014251.1-P Field mustard cytosol 55.6 59.1
Bra018848.1-P Field mustard cytosol 54.12 58.18
CDY03601 Canola cytosol 55.18 58.13
PGSC0003DMT400058477 Potato cytosol 57.93 58.05
CDY22795 Canola cytosol, plastid 53.49 56.98
Solyc01g008910.2.1 Tomato cytosol 57.08 56.72
AT1G50420.1 Thale cress cytosol 57.29 56.22
KRH77666 Soybean endoplasmic reticulum, nucleus, peroxisome, plastid 54.76 55.7
KRH27822 Soybean nucleus, plastid 54.33 54.33
KRH29971 Soybean cytosol 44.4 47.51
KRH62871 Soybean cytosol 44.19 47.18
Os06t0211500-00 Rice cytosol 19.03 47.12
Os12t0138100-00 Rice cytosol 42.71 41.06
Os11t0141500-00 Rice cytosol 42.49 40.85
HORVU2Hr1G113490.1 Barley cytosol 27.06 40.63
HORVU2Hr1G113480.1 Barley cytosol 27.06 40.63
TraesCS2D01G534700.1 Wheat cytosol 26.85 40.45
TraesCS6D01G055100.1 Wheat cytosol 26.22 39.49
Zm00001d023248_P001 Maize cytosol 42.07 39.33
TraesCS4B01G133000.1 Wheat cytosol, nucleus, plastid 11.84 38.36
TraesCS2D01G055700.1 Wheat extracellular, golgi, mitochondrion, plastid 25.16 38.14
TraesCS2A01G532900.1 Wheat cytosol 34.04 37.44
TraesCS5B01G133800.1 Wheat mitochondrion 43.34 37.14
TraesCS5A01G135000.1 Wheat mitochondrion 43.34 36.94
HORVU5Hr1G043310.1 Barley cytosol 42.92 36.91
TraesCS5D01G139500.1 Wheat mitochondrion 43.13 36.49
EES16518 Sorghum cytosol 34.67 36.44
KXG22822 Sorghum mitochondrion 42.92 35.18
GSMUA_Achr1P16230_001 Banana cytosol 26.0 34.55
TraesCS2B01G562400.1 Wheat cytosol 33.83 33.76
EES09233 Sorghum cytosol 34.67 33.68
GSMUA_Achr1P09360_001 Banana cytosol 26.22 33.6
HORVU2Hr1G113360.1 Barley cytosol 33.19 33.05
TraesCSU01G014000.1 Wheat cytosol 20.51 32.99
OQU77884 Sorghum plasma membrane 31.71 32.97
HORVU4Hr1G026010.3 Barley cytosol 31.08 32.96
TraesCS4A01G185900.1 Wheat cytosol 30.87 32.74
Os12t0138200-00 Rice cytosol 34.88 32.35
Zm00001d037901_P001 Maize cytosol, peroxisome, plastid 31.5 32.25
Os11t0141700-00 Rice cytosol 34.46 32.21
GSMUA_AchrUn_... Banana cytosol 26.0 32.2
GSMUA_Achr1P19470_001 Banana nucleus 25.37 31.33
TraesCS4D01G127800.2 Wheat mitochondrion 31.29 31.16
Zm00001d052464_P001 Maize cytosol, plasma membrane, plastid 31.92 31.01
OQU77885 Sorghum cytosol 31.5 30.91
GSMUA_Achr11P... Banana cytosol 71.67 30.76
Zm00001d052463_P001 Maize cytosol 33.4 30.21
GSMUA_Achr7P16880_001 Banana cytosol 24.1 30.08
GSMUA_Achr4P23590_001 Banana cytosol, mitochondrion, nucleus, plastid 19.24 29.55
Zm00001d023247_P001 Maize plastid 32.35 27.32
GSMUA_Achr6P17870_001 Banana cytosol 25.58 27.13
CDY37137 Canola plastid 53.07 26.31
GSMUA_Achr10P... Banana cytosol 26.43 26.15
Os05t0378200-00 Rice cytosol 30.44 26.13
GSMUA_Achr8P01180_001 Banana nucleus 25.16 26.04
GSMUA_Achr10P... Banana nucleus 24.1 25.97
GSMUA_Achr8P18250_001 Banana cytosol 26.22 25.89
Os05t0378500-00 Rice plastid 28.75 24.29
GSMUA_Achr11P... Banana plastid 28.75 23.69
GSMUA_AchrUn_... Banana cytosol 25.79 22.8
GSMUA_Achr6P20830_001 Banana nucleus 29.39 22.79
GSMUA_Achr3P30530_001 Banana cytosol 27.06 22.18
GSMUA_Achr6P34550_001 Banana mitochondrion, nucleus, peroxisome, plastid 27.7 21.44
GSMUA_Achr8P09400_001 Banana cytosol 30.44 21.43
GSMUA_Achr4P07320_001 Banana cytosol 24.74 20.86
GSMUA_Achr7P05850_001 Banana mitochondrion 28.33 20.62
GSMUA_Achr1P18840_001 Banana cytosol 26.43 20.36
GSMUA_Achr1P21300_001 Banana nucleus 21.99 20.16
GSMUA_Achr5P21440_001 Banana nucleus, plastid 28.96 19.38
GSMUA_Achr4P19750_001 Banana cytosol, mitochondrion, nucleus, plastid 29.18 16.01
Os12t0138166-00 Rice endoplasmic reticulum, extracellular 1.48 1.98
Os11t0141550-01 Rice cytosol 0.21 0.78
Protein Annotations
MapMan:15.5.12GO:GO:0000989GO:GO:0003674GO:GO:0003712GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr11G05840_001EnsemblPlants:GSMUA_Achr11P05840_001EnsemblPlants:GSMUA_Achr11T05840_001
InterPro:IPR005202UniProt:M0RPR4PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636PANTHER:PTHR31636:SF13
InterPro:Scarecrow-like_3InterPro:TF_GRASUniParc:UPI000295614BSEG:seg::
Description
Scarecrow-like protein 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05840_001]
Coordinates
chr11:+:4359562..4360983
Molecular Weight (calculated)
52703.2 Da
IEP (calculated)
6.674
GRAVY (calculated)
-0.146
Length
473 amino acids
Sequence
(BLAST)
001: MTPLTANVAR DEGSSSVTSS PLKTFSLMSL SPPPLPPYAP WLRELKSDER GLCLIHLLLN CANHVAAGSL DRANAFLEQI ALLAAPDGDA MQRIASHFTE
101: ALARRALRLW PGLYHAIDST RTVLLPLAEA AAARRHFLDL CPFLRLAFVV TNQAIMEAME GERVVHIVDL NVSDATQWIS LLQGLRARPE DPPHLKITGV
201: HEHRELLNRT AVRLSEEAER LDIPFQFNAV VSRLDNLDVE SLRVKTGEAL AISSVLQLHS LLASNDSASD PRKAQRVAPI SQLNLGEFLD KDHAANGHSS
301: SVESALSSPF ASASSPARMD SFLASLWGLS PKLMVVTEQE ANHNAPALSE RFVEALFYYA AMFDCLDSTV PRQSIERLRV EKMLLGEEIK NIIACEGWER
401: KERHEKLQKW AQRMDSAGFG MVPLSYYGMP ARRLLHSFGC DGYKVKDENG CFMVCWQDRS LYSISAWRCK RYD
Best Arabidopsis Sequence Match ( AT1G50420.1 )
(BLAST)
001: MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
Arabidopsis Description
SCL3Scarecrow-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPR8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.