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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plastid 3
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0009g02390.t01 Wine grape cytosol 76.15 76.79
GSMUA_Achr8P09690_001 Banana cytosol 60.88 65.25
HORVU3Hr1G106260.1 Barley cytosol 23.64 63.13
KRH29971 Soybean cytosol 58.37 63.12
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome, plastid 61.51 62.16
KRH62871 Soybean cytosol 57.32 61.85
Os01t0948200-00 Rice cytosol 53.14 57.47
TraesCS3A01G487500.1 Wheat cytosol, plastid 52.72 56.38
TraesCS3B01G535100.1 Wheat cytosol 52.51 55.41
TraesCS3D01G482600.1 Wheat cytosol 52.72 55.38
Zm00001d042127_P001 Maize plastid 51.05 54.59
Zm00001d011881_P001 Maize cytosol 50.63 53.9
EES02045 Sorghum cytosol, plastid 50.84 52.94
Os06t0211500-00 Rice cytosol 18.2 45.55
Os12t0138100-00 Rice cytosol 41.21 40.04
Os11t0141500-00 Rice cytosol 41.21 40.04
Zm00001d023248_P001 Maize cytosol 41.42 39.13
TraesCS6D01G055100.1 Wheat cytosol 25.52 38.85
HORVU2Hr1G113480.1 Barley cytosol 25.52 38.73
HORVU2Hr1G113490.1 Barley cytosol 25.52 38.73
TraesCS2D01G534700.1 Wheat cytosol 25.31 38.53
TraesCS2D01G055700.1 Wheat extracellular, golgi, mitochondrion, plastid 24.69 37.82
TraesCS5B01G133800.1 Wheat mitochondrion 43.31 37.5
TraesCS5A01G135000.1 Wheat mitochondrion 43.31 37.3
TraesCS5D01G139500.1 Wheat mitochondrion 43.1 36.85
HORVU5Hr1G043310.1 Barley cytosol 42.26 36.73
TraesCS2A01G532900.1 Wheat cytosol 32.85 36.51
EES16518 Sorghum cytosol 33.47 35.56
TraesCS4B01G133000.1 Wheat cytosol, nucleus, plastid 10.67 34.93
KXG22822 Sorghum mitochondrion 41.42 34.32
VIT_19s0015g01930.t01 Wine grape cytosol 28.66 33.17
EES09233 Sorghum cytosol 33.47 32.85
HORVU4Hr1G026010.3 Barley cytosol 30.54 32.74
TraesCS2B01G562400.1 Wheat cytosol 32.43 32.7
HORVU2Hr1G113360.1 Barley cytosol 32.43 32.63
TraesCS4A01G185900.1 Wheat cytosol 30.13 32.29
Os11t0141700-00 Rice cytosol 33.05 31.23
Os12t0138200-00 Rice cytosol 33.05 30.98
TraesCS4D01G127800.2 Wheat mitochondrion 30.75 30.95
Zm00001d052463_P001 Maize cytosol 33.47 30.59
Zm00001d037901_P001 Maize cytosol, peroxisome, plastid 29.29 30.3
OQU77884 Sorghum plasma membrane 28.66 30.11
TraesCSU01G014000.1 Wheat cytosol 18.41 29.93
Zm00001d052464_P001 Maize cytosol, plasma membrane, plastid 30.13 29.57
VIT_03s0017g01660.t01 Wine grape plastid 27.2 29.41
VIT_18s0076g00200.t01 Wine grape cytosol 19.87 29.14
OQU77885 Sorghum cytosol 28.45 28.22
VIT_17s0000g10300.t01 Wine grape nucleus 30.13 27.75
VIT_14s0006g00640.t01 Wine grape cytosol 31.59 26.54
VIT_19s0085g00540.t01 Wine grape cytosol 28.66 25.85
VIT_01s0011g05260.t01 Wine grape cytosol 31.59 25.59
VIT_11s0016g04630.t01 Wine grape plastid 28.45 25.56
Zm00001d023247_P001 Maize plastid 29.92 25.54
Os05t0378200-00 Rice cytosol 28.87 25.05
GSMUA_Achr11P... Banana cytosol 57.11 24.77
VIT_07s0005g03700.t01 Wine grape cytosol 24.9 24.44
VIT_14s0068g01610.t01 Wine grape plastid 34.1 24.4
Os05t0378500-00 Rice plastid 27.62 23.57
VIT_02s0025g04000.t01 Wine grape plastid 30.96 22.56
VIT_04s0023g01660.t01 Wine grape cytosol 25.94 20.23
VIT_08s0056g00050.t01 Wine grape nucleus 31.59 19.31
Os12t0138166-00 Rice endoplasmic reticulum, extracellular 1.46 1.98
Os11t0141550-01 Rice cytosol 0.42 1.55
Protein Annotations
EntrezGene:100258442wikigene:100258442MapMan:15.5.12EMBL:AM431683ProteinID:CAN67001ProteinID:CAN67001.1
ProteinID:CCB44570ProteinID:CCB44570.1UniProt:F6GX84EMBL:FN594963GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987GO:GO:0043565InterPro:IPR005202EntrezGene:LOC100258442wikigene:LOC100258442
PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636PANTHER:PTHR31636:SF48InterPro:TF_GRASUniParc:UPI00015CAD40
ArrayExpress:VIT_13s0019g01220EnsemblPlantsGene:VIT_13s0019g01220EnsemblPlants:VIT_13s0019g01220.t01unigene:Vvi.23907RefSeq:XP_002267910RefSeq:XP_002267910.1
RefSeq:XP_010645688.1SEG:seg::::
Description
No Description!
Coordinates
chr13_random:-:2870430..2873060
Molecular Weight (calculated)
53426.7 Da
IEP (calculated)
5.517
GRAVY (calculated)
-0.097
Length
478 amino acids
Sequence
(BLAST)
001: MAGMIQEDGS SSVTSSPLQI FSLMSLSPGL GSPYPWLKEL KSEERGLYLI RLLVACANHV AAGSIENANI GLEHISHLAS PDGDTVQRIA AYFTEALADR
101: MLKGWPGLHK ALNSTKISSI SEEILVQKLF FELCPFLKLS YVITNQAIIE AMEGEKMVHI IDLNSFESAQ WINLLQSLSA RPEGPPHLRI TGIHEQKEVL
201: DLMALQLTKE AEKLDIPFQF NPIVSKLENL DFESLRVKTG EALAISSVLQ LHTLLAIDDE MVGKSPSASK NTSAVHLQRV LQMNQRTLGE WLEKDLPNVY
301: IPSPESASAS TTSPLSLASS PKMGSFLAAL WGLSPKLMVV TEQESNNNCP TLMERVMEAL NFYAALFDCL ESTLSRASIE RQKVEKMLFG EEIKNIIACE
401: GPERKERHEK LEKWVMRLEL AGFGRVPLSY QGMLQASRLL VSYGYDGYRM KEENGCLVIC WQDRPLFSVS AWRFKRYD
Best Arabidopsis Sequence Match ( AT1G50420.1 )
(BLAST)
001: MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
Arabidopsis Description
SCL3Scarecrow-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPR8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.