Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_06s0009g02390.t01 | Wine grape | cytosol | 76.15 | 76.79 |
GSMUA_Achr8P09690_001 | Banana | cytosol | 60.88 | 65.25 |
HORVU3Hr1G106260.1 | Barley | cytosol | 23.64 | 63.13 |
KRH29971 | Soybean | cytosol | 58.37 | 63.12 |
GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 61.51 | 62.16 |
KRH62871 | Soybean | cytosol | 57.32 | 61.85 |
Os01t0948200-00 | Rice | cytosol | 53.14 | 57.47 |
TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 52.72 | 56.38 |
TraesCS3B01G535100.1 | Wheat | cytosol | 52.51 | 55.41 |
TraesCS3D01G482600.1 | Wheat | cytosol | 52.72 | 55.38 |
Zm00001d042127_P001 | Maize | plastid | 51.05 | 54.59 |
Zm00001d011881_P001 | Maize | cytosol | 50.63 | 53.9 |
EES02045 | Sorghum | cytosol, plastid | 50.84 | 52.94 |
Os06t0211500-00 | Rice | cytosol | 18.2 | 45.55 |
Os12t0138100-00 | Rice | cytosol | 41.21 | 40.04 |
Os11t0141500-00 | Rice | cytosol | 41.21 | 40.04 |
Zm00001d023248_P001 | Maize | cytosol | 41.42 | 39.13 |
TraesCS6D01G055100.1 | Wheat | cytosol | 25.52 | 38.85 |
HORVU2Hr1G113480.1 | Barley | cytosol | 25.52 | 38.73 |
HORVU2Hr1G113490.1 | Barley | cytosol | 25.52 | 38.73 |
TraesCS2D01G534700.1 | Wheat | cytosol | 25.31 | 38.53 |
TraesCS2D01G055700.1 | Wheat | extracellular, golgi, mitochondrion, plastid | 24.69 | 37.82 |
TraesCS5B01G133800.1 | Wheat | mitochondrion | 43.31 | 37.5 |
TraesCS5A01G135000.1 | Wheat | mitochondrion | 43.31 | 37.3 |
TraesCS5D01G139500.1 | Wheat | mitochondrion | 43.1 | 36.85 |
HORVU5Hr1G043310.1 | Barley | cytosol | 42.26 | 36.73 |
TraesCS2A01G532900.1 | Wheat | cytosol | 32.85 | 36.51 |
EES16518 | Sorghum | cytosol | 33.47 | 35.56 |
TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 10.67 | 34.93 |
KXG22822 | Sorghum | mitochondrion | 41.42 | 34.32 |
VIT_19s0015g01930.t01 | Wine grape | cytosol | 28.66 | 33.17 |
EES09233 | Sorghum | cytosol | 33.47 | 32.85 |
HORVU4Hr1G026010.3 | Barley | cytosol | 30.54 | 32.74 |
TraesCS2B01G562400.1 | Wheat | cytosol | 32.43 | 32.7 |
HORVU2Hr1G113360.1 | Barley | cytosol | 32.43 | 32.63 |
TraesCS4A01G185900.1 | Wheat | cytosol | 30.13 | 32.29 |
Os11t0141700-00 | Rice | cytosol | 33.05 | 31.23 |
Os12t0138200-00 | Rice | cytosol | 33.05 | 30.98 |
TraesCS4D01G127800.2 | Wheat | mitochondrion | 30.75 | 30.95 |
Zm00001d052463_P001 | Maize | cytosol | 33.47 | 30.59 |
Zm00001d037901_P001 | Maize | cytosol, peroxisome, plastid | 29.29 | 30.3 |
OQU77884 | Sorghum | plasma membrane | 28.66 | 30.11 |
TraesCSU01G014000.1 | Wheat | cytosol | 18.41 | 29.93 |
Zm00001d052464_P001 | Maize | cytosol, plasma membrane, plastid | 30.13 | 29.57 |
VIT_03s0017g01660.t01 | Wine grape | plastid | 27.2 | 29.41 |
VIT_18s0076g00200.t01 | Wine grape | cytosol | 19.87 | 29.14 |
OQU77885 | Sorghum | cytosol | 28.45 | 28.22 |
VIT_17s0000g10300.t01 | Wine grape | nucleus | 30.13 | 27.75 |
VIT_14s0006g00640.t01 | Wine grape | cytosol | 31.59 | 26.54 |
VIT_19s0085g00540.t01 | Wine grape | cytosol | 28.66 | 25.85 |
VIT_01s0011g05260.t01 | Wine grape | cytosol | 31.59 | 25.59 |
VIT_11s0016g04630.t01 | Wine grape | plastid | 28.45 | 25.56 |
Zm00001d023247_P001 | Maize | plastid | 29.92 | 25.54 |
Os05t0378200-00 | Rice | cytosol | 28.87 | 25.05 |
GSMUA_Achr11P... | Banana | cytosol | 57.11 | 24.77 |
VIT_07s0005g03700.t01 | Wine grape | cytosol | 24.9 | 24.44 |
VIT_14s0068g01610.t01 | Wine grape | plastid | 34.1 | 24.4 |
Os05t0378500-00 | Rice | plastid | 27.62 | 23.57 |
VIT_02s0025g04000.t01 | Wine grape | plastid | 30.96 | 22.56 |
VIT_04s0023g01660.t01 | Wine grape | cytosol | 25.94 | 20.23 |
VIT_08s0056g00050.t01 | Wine grape | nucleus | 31.59 | 19.31 |
Os12t0138166-00 | Rice | endoplasmic reticulum, extracellular | 1.46 | 1.98 |
Os11t0141550-01 | Rice | cytosol | 0.42 | 1.55 |
Protein Annotations
EntrezGene:100258442 | wikigene:100258442 | MapMan:15.5.12 | EMBL:AM431683 | ProteinID:CAN67001 | ProteinID:CAN67001.1 |
ProteinID:CCB44570 | ProteinID:CCB44570.1 | UniProt:F6GX84 | EMBL:FN594963 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 | EntrezGene:LOC100258442 | wikigene:LOC100258442 |
PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF48 | InterPro:TF_GRAS | UniParc:UPI00015CAD40 |
ArrayExpress:VIT_13s0019g01220 | EnsemblPlantsGene:VIT_13s0019g01220 | EnsemblPlants:VIT_13s0019g01220.t01 | unigene:Vvi.23907 | RefSeq:XP_002267910 | RefSeq:XP_002267910.1 |
RefSeq:XP_010645688.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr13_random:-:2870430..2873060
Molecular Weight (calculated)
53426.7 Da
IEP (calculated)
5.517
GRAVY (calculated)
-0.097
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGMIQEDGS SSVTSSPLQI FSLMSLSPGL GSPYPWLKEL KSEERGLYLI RLLVACANHV AAGSIENANI GLEHISHLAS PDGDTVQRIA AYFTEALADR
101: MLKGWPGLHK ALNSTKISSI SEEILVQKLF FELCPFLKLS YVITNQAIIE AMEGEKMVHI IDLNSFESAQ WINLLQSLSA RPEGPPHLRI TGIHEQKEVL
201: DLMALQLTKE AEKLDIPFQF NPIVSKLENL DFESLRVKTG EALAISSVLQ LHTLLAIDDE MVGKSPSASK NTSAVHLQRV LQMNQRTLGE WLEKDLPNVY
301: IPSPESASAS TTSPLSLASS PKMGSFLAAL WGLSPKLMVV TEQESNNNCP TLMERVMEAL NFYAALFDCL ESTLSRASIE RQKVEKMLFG EEIKNIIACE
401: GPERKERHEK LEKWVMRLEL AGFGRVPLSY QGMLQASRLL VSYGYDGYRM KEENGCLVIC WQDRPLFSVS AWRFKRYD
101: MLKGWPGLHK ALNSTKISSI SEEILVQKLF FELCPFLKLS YVITNQAIIE AMEGEKMVHI IDLNSFESAQ WINLLQSLSA RPEGPPHLRI TGIHEQKEVL
201: DLMALQLTKE AEKLDIPFQF NPIVSKLENL DFESLRVKTG EALAISSVLQ LHTLLAIDDE MVGKSPSASK NTSAVHLQRV LQMNQRTLGE WLEKDLPNVY
301: IPSPESASAS TTSPLSLASS PKMGSFLAAL WGLSPKLMVV TEQESNNNCP TLMERVMEAL NFYAALFDCL ESTLSRASIE RQKVEKMLFG EEIKNIIACE
401: GPERKERHEK LEKWVMRLEL AGFGRVPLSY QGMLQASRLL VSYGYDGYRM KEENGCLVIC WQDRPLFSVS AWRFKRYD
001: MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
Arabidopsis Description
SCL3Scarecrow-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.