Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G106260.1 | Barley | cytosol | 39.07 | 98.88 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 96.03 | 97.32 |
| TraesCS3D01G482600.1 | Wheat | cytosol | 97.35 | 96.92 |
| Os01t0948200-00 | Rice | cytosol | 89.4 | 91.63 |
| Zm00001d042127_P001 | Maize | plastid | 84.99 | 86.13 |
| EES02045 | Sorghum | cytosol, plastid | 85.87 | 84.75 |
| Zm00001d011881_P001 | Maize | cytosol | 83.0 | 83.74 |
| GSMUA_Achr8P09690_001 | Banana | cytosol | 63.36 | 64.35 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome, plastid | 62.25 | 59.62 |
| CDY68881 | Canola | cytosol | 30.91 | 57.38 |
| CDY45059 | Canola | cytosol | 37.75 | 56.25 |
| Bra018848.1-P | Field mustard | cytosol | 52.32 | 53.86 |
| Bra014251.1-P | Field mustard | cytosol | 52.76 | 53.71 |
| CDY22795 | Canola | cytosol, plastid | 51.66 | 52.7 |
| Solyc12g099900.1.1 | Tomato | nucleus | 54.3 | 52.56 |
| VIT_13s0019g01220.t01 | Wine grape | cytosol | 55.41 | 52.51 |
| PGSC0003DMT400011839 | Potato | cytosol | 54.08 | 52.35 |
| CDY03601 | Canola | cytosol | 51.88 | 52.34 |
| VIT_06s0009g02390.t01 | Wine grape | cytosol | 54.08 | 51.69 |
| AT1G50420.1 | Thale cress | cytosol | 54.53 | 51.24 |
| PGSC0003DMT400058477 | Potato | cytosol | 53.2 | 51.06 |
| Solyc01g008910.2.1 | Tomato | cytosol | 53.64 | 51.05 |
| KRH29080 | Soybean | cytosol | 50.33 | 50.11 |
| KRH77666 | Soybean | endoplasmic reticulum, nucleus, peroxisome, plastid | 51.43 | 50.11 |
| KRH24106 | Soybean | cytosol, nucleus, peroxisome | 49.89 | 49.67 |
| KRH27822 | Soybean | nucleus, plastid | 50.99 | 48.84 |
| KRH29971 | Soybean | cytosol | 41.5 | 42.53 |
| TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 13.69 | 42.47 |
| KRH62871 | Soybean | cytosol | 41.5 | 42.44 |
| TraesCS2B01G562400.1 | Wheat | cytosol | 40.18 | 38.4 |
| TraesCS5B01G133800.1 | Wheat | mitochondrion | 45.03 | 36.96 |
| TraesCS6B01G191800.1 | Wheat | cytosol | 28.7 | 32.91 |
| TraesCS7B01G285500.1 | Wheat | cytosol | 29.36 | 31.0 |
| TraesCS4B01G342800.1 | Wheat | cytosol | 29.8 | 30.68 |
| TraesCS2B01G228000.1 | Wheat | cytosol | 28.92 | 29.18 |
| TraesCS3B01G262400.1 | Wheat | mitochondrion, plastid | 33.11 | 28.36 |
| TraesCS3B01G424600.1 | Wheat | cytosol | 32.45 | 28.32 |
| TraesCS3B01G424500.1 | Wheat | cytosol | 31.79 | 27.85 |
| TraesCS1B01G314500.1 | Wheat | peroxisome | 27.37 | 26.9 |
| TraesCS1B01G443800.1 | Wheat | cytosol | 30.24 | 26.5 |
| TraesCS4B01G043100.1 | Wheat | cytosol | 34.44 | 25.12 |
| CDY37137 | Canola | plastid | 51.66 | 24.53 |
| GSMUA_Achr11P... | Banana | cytosol | 59.6 | 24.5 |
| TraesCS4B01G054000.1 | Wheat | cytosol | 28.92 | 23.95 |
| TraesCS5B01G143100.1 | Wheat | plastid | 32.89 | 23.35 |
| TraesCS2B01G320700.1 | Wheat | cytosol, mitochondrion, nucleus | 24.28 | 22.63 |
| TraesCS2B01G112100.1 | Wheat | nucleus | 35.54 | 22.52 |
| TraesCS4B01G124000.1 | Wheat | plastid | 33.33 | 22.24 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G535100.1 | EnsemblPlantsGene:TraesCS3B01G535100 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR005202 | InterPro:Scarecrow-like_3 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF13 | PFAM:PF03514 |
| PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:774947165..774948526
Molecular Weight (calculated)
49252.8 Da
IEP (calculated)
7.023
GRAVY (calculated)
-0.145
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHQDEGSSS SVTSSPLQNF SNMPLHPHPG AGAAGAGATP PWMLRELRSD ERGLCLIHLL LNCAAAASSG RLDAANAALE HIATLAAPDG DAMQRVAAAF
101: AEALARRALR AWPGLCRALL LPRAGPTPAE VAVARRHFFD LCPFLRLAGA AANQAILEAM ESEKIVHVID LGGADATQWL ELLHLLAARP EGPPHFRLTA
201: VHEHKDLLSK TAMALTKEAE RLDVPFQFNP VVSRLDALDV ESLRVKTGEA LAISSSLQLH RLLATDDDTP AAPTADKERR RKSSPDSSGL LSPSTSRADA
301: FLGALWGLSP KVMVVAEQEA SHNTPGLTER FVEALNYYAA LFDCLEVGAA RGSVERARVE RWLLGEEIKN IVACDGAERR ERHERLDRWA ARMEGAGFGR
401: VPLSYYALLQ ARRAAQGLGC DGFKVREEKG TFFLCWQERA LFSVSAWRGR RFD
101: AEALARRALR AWPGLCRALL LPRAGPTPAE VAVARRHFFD LCPFLRLAGA AANQAILEAM ESEKIVHVID LGGADATQWL ELLHLLAARP EGPPHFRLTA
201: VHEHKDLLSK TAMALTKEAE RLDVPFQFNP VVSRLDALDV ESLRVKTGEA LAISSSLQLH RLLATDDDTP AAPTADKERR RKSSPDSSGL LSPSTSRADA
301: FLGALWGLSP KVMVVAEQEA SHNTPGLTER FVEALNYYAA LFDCLEVGAA RGSVERARVE RWLLGEEIKN IVACDGAERR ERHERLDRWA ARMEGAGFGR
401: VPLSYYALLQ ARRAAQGLGC DGFKVREEKG TFFLCWQERA LFSVSAWRGR RFD
001: MVAMFQEDNG TSSVASSPLQ VFSTMSLNRP TLLASSSPFH CLKDLKPEER GLYLIHLLLT CANHVASGSL QNANAALEQL SHLASPDGDT MQRIAAYFTE
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
101: ALANRILKSW PGLYKALNAT QTRTNNVSEE IHVRRLFFEM FPILKVSYLL TNRAILEAME GEKMVHVIDL DASEPAQWLA LLQAFNSRPE GPPHLRITGV
201: HHQKEVLEQM AHRLIEEAEK LDIPFQFNPV VSRLDCLNVE QLRVKTGEAL AVSSVLQLHT FLASDDDLMR KNCALRFQNN PSGVDLQRVL MMSHGSAAEA
301: RENDMSNNNG YSPSGDSASS LPLPSSGRTD SFLNAIWGLS PKVMVVTEQD SDHNGSTLME RLLESLYTYA ALFDCLETKV PRTSQDRIKV EKMLFGEEIK
401: NIISCEGFER RERHEKLEKW SQRIDLAGFG NVPLSYYAML QARRLLQGCG FDGYRIKEES GCAVICWQDR PLYSVSAWRC RK
Arabidopsis Description
SCL3Scarecrow-like protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.