Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G511900.1 | Wheat | cytosol | 89.32 | 90.14 |
| TraesCS4D01G338800.1 | Wheat | cytoskeleton, cytosol, peroxisome, plastid | 93.18 | 83.84 |
| TraesCS1B01G443800.1 | Wheat | cytosol | 85.91 | 73.11 |
| HORVU1Hr1G090800.1 | Barley | mitochondrion | 82.73 | 67.91 |
| Os05t0574900-01 | Rice | plasma membrane | 54.09 | 47.6 |
| KRG92263 | Soybean | cytosol | 42.05 | 46.37 |
| TraesCS3B01G262400.1 | Wheat | mitochondrion, plastid | 49.09 | 40.83 |
| Zm00001d009646_P001 | Maize | plastid | 43.18 | 40.0 |
| KXG23987 | Sorghum | cytosol | 47.27 | 39.62 |
| KRH34544 | Soybean | cytosol | 41.36 | 37.3 |
| KRH63032 | Soybean | cytosol | 41.36 | 36.18 |
| KRH54840 | Soybean | cytosol | 41.36 | 36.04 |
| VIT_11s0016g04630.t01 | Wine grape | plastid | 41.82 | 34.59 |
| GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 42.05 | 30.28 |
| TraesCS3B01G535100.1 | Wheat | cytosol | 30.68 | 29.8 |
| TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 9.32 | 28.08 |
| TraesCS7B01G285500.1 | Wheat | cytosol | 26.82 | 27.51 |
| TraesCS6B01G191800.1 | Wheat | cytosol | 24.55 | 27.34 |
| TraesCS4B01G043100.1 | Wheat | cytosol | 37.5 | 26.57 |
| TraesCS2B01G228000.1 | Wheat | cytosol | 25.68 | 25.17 |
| TraesCS3B01G424600.1 | Wheat | cytosol | 28.86 | 24.47 |
| TraesCS3B01G424500.1 | Wheat | cytosol | 28.41 | 24.18 |
| TraesCS1B01G314500.1 | Wheat | peroxisome | 24.77 | 23.64 |
| TraesCS2B01G320700.1 | Wheat | cytosol, mitochondrion, nucleus | 25.68 | 23.25 |
| TraesCS5B01G133800.1 | Wheat | mitochondrion | 29.09 | 23.19 |
| TraesCS4B01G054000.1 | Wheat | cytosol | 27.73 | 22.3 |
| TraesCS5B01G143100.1 | Wheat | plastid | 31.59 | 21.79 |
| TraesCS2B01G562400.1 | Wheat | cytosol | 23.18 | 21.52 |
| TraesCS4B01G124000.1 | Wheat | plastid | 31.14 | 20.18 |
| TraesCS2B01G112100.1 | Wheat | nucleus | 32.73 | 20.14 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G342800.1 | EnsemblPlantsGene:TraesCS4B01G342800 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF128 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:11.6.2.2 | MapMan:15.5.12 | : |
Description
No Description!
Coordinates
chr4B:+:636737253..636738575
Molecular Weight (calculated)
47553.7 Da
IEP (calculated)
6.956
GRAVY (calculated)
-0.040
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MYASAAPPTV PPPVAEAAAR RHQEAENVAL YLIHILRKCA ETIEAGDYAA AAGKLTEAHT MLATSVSTTT GIGRVASHFT AALAQRLFPA TPHSSFALDT
101: SPERAGELYR QFYNAGPYLK FAHFTANQAI LEAFEGCDRV HVVDLAIKQG MQWPALIQAL SIRPGGPPSV RITGVGSAPA ADEVGLRLAE FARAMNVPFS
201: FQRVTDDSLD QLRPWMFQVL PGEAVAVNSI CQLHRVLVNP DAASTSLPSP IDIVLGWIAS MQPRVFTVVE QEADHNKPGL VTRFENAMFY YGSVLDSMEA
301: MSVSRRGAIG NGAGADAYVQ REIFNIVCYE GSARTERHEP LAYWCSRLWR TGFTHVPLGP SAAYQAAKFV RVFSGTGFRV QEIGGCLSLA WHEHPLLTVS
401: VWSAMPADRA GTAKEHADKH KLKMSIGESS GGHLPDAGAQ
101: SPERAGELYR QFYNAGPYLK FAHFTANQAI LEAFEGCDRV HVVDLAIKQG MQWPALIQAL SIRPGGPPSV RITGVGSAPA ADEVGLRLAE FARAMNVPFS
201: FQRVTDDSLD QLRPWMFQVL PGEAVAVNSI CQLHRVLVNP DAASTSLPSP IDIVLGWIAS MQPRVFTVVE QEADHNKPGL VTRFENAMFY YGSVLDSMEA
301: MSVSRRGAIG NGAGADAYVQ REIFNIVCYE GSARTERHEP LAYWCSRLWR TGFTHVPLGP SAAYQAAKFV RVFSGTGFRV QEIGGCLSLA WHEHPLLTVS
401: VWSAMPADRA GTAKEHADKH KLKMSIGESS GGHLPDAGAQ
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.