Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G421200.1 | Wheat | cytosol | 94.58 | 96.26 |
| TraesCS1A01G413800.1 | Wheat | cytosol, nucleus, plastid | 87.62 | 93.98 |
| TraesCS4B01G342800.1 | Wheat | cytosol | 73.11 | 85.91 |
| HORVU1Hr1G090800.1 | Barley | mitochondrion | 78.92 | 76.12 |
| Os05t0574900-01 | Rice | plasma membrane | 47.97 | 49.6 |
| KRG92263 | Soybean | cytosol | 35.2 | 45.61 |
| TraesCS3B01G262400.1 | Wheat | mitochondrion, plastid | 43.91 | 42.91 |
| KXG23987 | Sorghum | cytosol | 41.59 | 40.95 |
| Zm00001d009646_P001 | Maize | plastid | 37.33 | 40.63 |
| KRH34544 | Soybean | cytosol | 35.01 | 37.09 |
| KRH54840 | Soybean | cytosol | 35.98 | 36.83 |
| KRH63032 | Soybean | cytosol | 35.78 | 36.78 |
| VIT_11s0016g04630.t01 | Wine grape | plastid | 36.36 | 35.34 |
| GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 37.33 | 31.59 |
| TraesCS3B01G535100.1 | Wheat | cytosol | 26.5 | 30.24 |
| TraesCS6B01G191800.1 | Wheat | cytosol | 22.63 | 29.62 |
| TraesCS7B01G285500.1 | Wheat | cytosol | 23.02 | 27.74 |
| TraesCS4B01G133000.1 | Wheat | cytosol, nucleus, plastid | 7.74 | 27.4 |
| TraesCS4B01G043100.1 | Wheat | cytosol | 31.72 | 26.41 |
| TraesCS2B01G228000.1 | Wheat | cytosol | 22.44 | 25.84 |
| TraesCS3B01G424600.1 | Wheat | cytosol | 24.56 | 24.47 |
| TraesCS3B01G424500.1 | Wheat | cytosol | 24.37 | 24.37 |
| TraesCS2B01G320700.1 | Wheat | cytosol, mitochondrion, nucleus | 22.05 | 23.46 |
| TraesCS1B01G314500.1 | Wheat | peroxisome | 20.89 | 23.43 |
| TraesCS5B01G133800.1 | Wheat | mitochondrion | 24.95 | 23.37 |
| TraesCS2B01G562400.1 | Wheat | cytosol | 20.7 | 22.57 |
| TraesCS4B01G054000.1 | Wheat | cytosol | 23.79 | 22.49 |
| TraesCS5B01G143100.1 | Wheat | plastid | 27.27 | 22.1 |
| TraesCS2B01G112100.1 | Wheat | nucleus | 27.85 | 20.14 |
| TraesCS4B01G124000.1 | Wheat | plastid | 26.11 | 19.88 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G443800.1 | EnsemblPlantsGene:TraesCS1B01G443800 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF128 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr1B:+:664807427..664808980
Molecular Weight (calculated)
55354.8 Da
IEP (calculated)
6.229
GRAVY (calculated)
-0.037
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMDAHTQPA LTAFTQLARE EHMAHFAFSW QGMEPAPAAS LSGAGATLPL HSVQGAAAAR NSADAARNSA DASYCPDPAT YAPAVLATVP PTIAEAGAKR
101: RQDAENIALY LIHILHKCAE AIEAGDYAVA AGKLSEARTM LATSVSTTTG IGRVASHFAA ALAHRLFPAS PHSSFTLDAS PERAGELYRQ FYDAGPYLKF
201: AHFTANQAIL EAFEGCDRVH VVDLAIKQGV QWTTLIQALS IRPGGPPSVR ITGIGSAPAV DEAGLRLAEL ARAMNVPFSF QRFTDDSLDQ LKPWMFQVLP
301: GEAVAVNSIC QLHRLLVDPD AASTSLPTPI DVVLGWIASM QPRVFTVVEQ EADHNKPRLP TRFENAMFYY GSVLDSMEAM SASRGGVIGN GAGADAYVQR
401: EIFDIVCGEG SARTERHEPL ACWCARLWRM GLTHVPLGPS AAYQAAKLVR MYSTAGFRVQ EIGGCLSLMW HERPLFTASV WSAMPADGAA EERADKHKLK
501: MSIGESSSGH LPDAGAQ
101: RQDAENIALY LIHILHKCAE AIEAGDYAVA AGKLSEARTM LATSVSTTTG IGRVASHFAA ALAHRLFPAS PHSSFTLDAS PERAGELYRQ FYDAGPYLKF
201: AHFTANQAIL EAFEGCDRVH VVDLAIKQGV QWTTLIQALS IRPGGPPSVR ITGIGSAPAV DEAGLRLAEL ARAMNVPFSF QRFTDDSLDQ LKPWMFQVLP
301: GEAVAVNSIC QLHRLLVDPD AASTSLPTPI DVVLGWIASM QPRVFTVVEQ EADHNKPRLP TRFENAMFYY GSVLDSMEAM SASRGGVIGN GAGADAYVQR
401: EIFDIVCGEG SARTERHEPL ACWCARLWRM GLTHVPLGPS AAYQAAKLVR MYSTAGFRVQ EIGGCLSLMW HERPLFTASV WSAMPADGAA EERADKHKLK
501: MSIGESSSGH LPDAGAQ
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.