Factsheet for TraesCS1A01G413800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G421200.1	Wheat	cytosol	93.78	88.98
TraesCS1B01G443800.1	Wheat	cytosol	93.98	87.62
TraesCS5A01G511900.1	Wheat	cytosol	76.35	84.4
HORVU1Hr1G090800.1	Barley	mitochondrion	78.84	70.9
Os05t0574900-01	Rice	plasma membrane	51.66	49.8
KRG92263	Soybean	cytosol	38.38	46.37
TraesCS3A01G233000.1	Wheat	plasma membrane	46.68	44.91
KXG23987	Sorghum	cytosol	44.81	41.14
Zm00001d009646_P001	Maize	plastid	40.46	41.05
TraesCS4A01G466700.1	Wheat	cytosol, nucleus, peroxisome	26.56	39.26
KRH34544	Soybean	cytosol	39.0	38.52
KRH54840	Soybean	cytosol	39.21	37.43
KRH63032	Soybean	cytosol	39.0	37.38
VIT_11s0016g04630.t01	Wine grape	plastid	39.83	36.09
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	40.04	31.59
TraesCS3A01G487500.1	Wheat	cytosol, plastid	27.8	29.98
TraesCS6A01G159500.1	Wheat	cytosol	23.44	28.83
TraesCS7A01G382800.1	Wheat	cytosol	24.27	27.46
TraesCS4A01G271000.1	Wheat	cytosol	34.02	26.45
TraesCS2A01G532900.1	Wheat	cytosol	23.24	26.05
TraesCS2A01G200700.1	Wheat	cytosol	24.27	26.0
TraesCS3A01G392600.1	Wheat	cytosol	24.27	24.48
TraesCS3A01G392400.1	Wheat	cytosol	26.14	24.28
TraesCS3A01G392500.1	Wheat	cytosol	25.93	24.18
TraesCS2A01G304000.1	Wheat	cytosol, mitochondrion, nucleus	23.86	23.96
TraesCS5A01G135000.1	Wheat	mitochondrion	26.76	23.24
TraesCS4A01G185900.1	Wheat	cytosol	20.95	22.65
TraesCS1A01G304000.1	Wheat	peroxisome	23.03	22.61
TraesCS4A01G260600.1	Wheat	cytosol	25.52	22.57
TraesCS4A01G191300.1	Wheat	cytosol	28.22	22.04
TraesCS5A01G144000.1	Wheat	plastid	29.25	21.76
TraesCS7A01G059000.1	Wheat	plastid	28.01	21.53
TraesCS4A01G430600.1	Wheat	plastid	27.59	21.42
TraesCS2A01G096800.1	Wheat	nucleus	30.29	20.42

Protein Annotations

EnsemblPlants:TraesCS1A01G413800.1	EnsemblPlantsGene:TraesCS1A01G413800	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF128
PFAM:PF03514	PFscan:PS50985	SEG:seg	MapMan:15.5.12	:	:

Description

No Description!

Coordinates

chr1A:+:573441183..573442631

Molecular Weight (calculated)

51256.9 Da

IEP (calculated)

6.150

GRAVY (calculated)

-0.019

Length

482 amino acids

Sequence
(BLAST)

001: MEPAPAASLS GAGATLPLHS VQGAAAATNS ADASYCLDPA TYAPAVLPTI PPAVAEVGAK RRQDAENIAL YLIHILHKCA EAIEAGDYAV AAGKLSEART
101: ILATSVSTTT GIGRVASHFA AALAHRLFPA SPHSSFTQDA SPERAGELYR QFYDAGPYLK FAHYTANQAI LEAFEGCDRV HVVDLAIKQG VQWPALIQAL
201: SGRPGGPPSV RITGVGSAPA VDEAGLRLAE LARAMNVPFS FQRVTEDSLD QLKPWMFQVL PGEAVAVNSI CQLHRLLVDP DAASTSLPTP IDVVLGWIAS
301: MQPRVFTVVE QEADHNKPRL STRFENAMFY YGSVLDSMEA MSVSRGDVIG NGAGADAYVQ REIFDIVCGE GSARTERHEP LACWCDRLWR MGLTHVPLGP
401: SAAYQAAKLV RMFSSAGFRV QEIGGCLSLM WHERPLFTAS VWSAMPANGA GPGAAEERAD KQKLKRSIGE SSSGHLPDAG AQ

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.