Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G262400.1 | Wheat | mitochondrion, plastid | 97.41 | 92.25 |
| TraesCS3D01G220100.3 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 95.21 | 88.83 |
| HORVU3Hr1G058100.1 | Barley | plastid | 94.61 | 84.19 |
| Os01t0646300-01 | Rice | cytosol | 81.24 | 82.22 |
| OQU87235 | Sorghum | extracellular | 46.51 | 78.98 |
| Zm00001d044065_P001 | Maize | cytosol | 70.66 | 74.53 |
| KRG92263 | Soybean | cytosol | 46.91 | 58.9 |
| TraesCS5A01G511900.1 | Wheat | cytosol | 43.31 | 49.77 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 31.94 | 49.08 |
| KRH34544 | Soybean | cytosol | 47.7 | 48.98 |
| KRH63032 | Soybean | cytosol | 48.9 | 48.71 |
| KRH54840 | Soybean | cytosol | 48.9 | 48.51 |
| VIT_11s0016g04630.t01 | Wine grape | plastid | 49.9 | 46.99 |
| TraesCS1A01G413800.1 | Wheat | cytosol, nucleus, plastid | 44.91 | 46.68 |
| GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 54.49 | 44.68 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 42.91 | 34.68 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 30.14 | 33.78 |
| TraesCS2A01G200700.1 | Wheat | cytosol | 29.14 | 32.44 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 24.55 | 31.38 |
| TraesCS3A01G392600.1 | Wheat | cytosol | 29.14 | 30.54 |
| TraesCS7A01G382800.1 | Wheat | cytosol | 25.55 | 30.05 |
| TraesCS3A01G392500.1 | Wheat | cytosol | 30.54 | 29.59 |
| TraesCS3A01G392400.1 | Wheat | cytosol | 30.54 | 29.48 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 24.75 | 28.84 |
| TraesCS2A01G304000.1 | Wheat | cytosol, mitochondrion, nucleus | 25.75 | 26.88 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 26.15 | 26.68 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 22.95 | 25.78 |
| TraesCS4A01G260600.1 | Wheat | cytosol | 27.54 | 25.32 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 27.35 | 24.68 |
| TraesCS4A01G191300.1 | Wheat | cytosol | 29.94 | 24.31 |
| TraesCS5A01G144000.1 | Wheat | plastid | 30.94 | 23.92 |
| TraesCS2A01G096800.1 | Wheat | nucleus | 34.13 | 23.92 |
| TraesCS4A01G430600.1 | Wheat | plastid | 28.34 | 22.87 |
| TraesCS7A01G059000.1 | Wheat | plastid | 28.34 | 22.65 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G233000.1 | EnsemblPlantsGene:TraesCS3A01G233000 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF7 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:11.6.2.2 | MapMan:15.5.12 | MapMan:26.6.2.1 |
Description
No Description!
Coordinates
chr3A:-:434949917..434951422
Molecular Weight (calculated)
53085.6 Da
IEP (calculated)
5.046
GRAVY (calculated)
-0.008
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMGTFPFQW PMDPAPALPS GLDGSLLPSL LPPPPAPVPD DGAAYYAAAD MQASSMPELA PPFPSRDAVA AELAMRRAEE EVAGIRLVHL LMSCAGAVEA
101: GDHALAAAHL ADANASLAAV STASGIGRVA VHFTDALSRR LFRSPATPPA TDAEHAFLYH HFYEACPYLK FAHFTANQAI LEAFHGCDSV HVIDFSLMQG
201: LQWPALIQAL ALRPGGPPFL RITGIGPPSP PGRDELRDVG LRLADLARSV RVRFSFRGVA ANSLDEVHPW MLQIAPGEAV AVNSVLQLHR LLADSADQAP
301: IDAVLDCVAS LQPKIFTVVE QEAEHNKPGF LDRFTEALFY YSAVFDSLDA ASANGTGNAM AEAYLQREIC DIVCNDGSAR MERHEPLSQW RDRLGRAGLS
401: AVPLGASALR QARMLLGLFS GEGHSVEEAE GCLTLGWHGR PLFSASAWRA VTVSGDVDGE DNHTSNNSNF SGSSGGGSDS NNSSSSNGKC SRVVGASNVF
501: L
101: GDHALAAAHL ADANASLAAV STASGIGRVA VHFTDALSRR LFRSPATPPA TDAEHAFLYH HFYEACPYLK FAHFTANQAI LEAFHGCDSV HVIDFSLMQG
201: LQWPALIQAL ALRPGGPPFL RITGIGPPSP PGRDELRDVG LRLADLARSV RVRFSFRGVA ANSLDEVHPW MLQIAPGEAV AVNSVLQLHR LLADSADQAP
301: IDAVLDCVAS LQPKIFTVVE QEAEHNKPGF LDRFTEALFY YSAVFDSLDA ASANGTGNAM AEAYLQREIC DIVCNDGSAR MERHEPLSQW RDRLGRAGLS
401: AVPLGASALR QARMLLGLFS GEGHSVEEAE GCLTLGWHGR PLFSASAWRA VTVSGDVDGE DNHTSNNSNF SGSSGGGSDS NNSSSSNGKC SRVVGASNVF
501: L
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.