Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G053600.1 | Wheat | plastid | 96.33 | 96.33 |
| TraesCS4A01G430600.1 | Wheat | plastid | 94.9 | 95.81 |
| HORVU7Hr1G010620.1 | Barley | cytosol | 85.17 | 94.85 |
| Os06t0127800-01 | Rice | plastid | 76.56 | 77.8 |
| Zm00001d045507_P001 | Maize | plastid | 74.8 | 76.14 |
| EER87757 | Sorghum | mitochondrion | 74.8 | 73.63 |
| GSMUA_Achr1P16230_001 | Banana | cytosol | 33.17 | 58.43 |
| GSMUA_Achr7P05850_001 | Banana | mitochondrion | 46.89 | 45.23 |
| GSMUA_Achr1P18840_001 | Banana | cytosol | 43.7 | 44.63 |
| VIT_02s0025g04000.t01 | Wine grape | plastid | 45.14 | 43.14 |
| PGSC0003DMT400007879 | Potato | plastid | 44.34 | 40.94 |
| Solyc08g080400.1.1 | Tomato | plastid | 44.18 | 40.8 |
| KRH57249 | Soybean | plastid | 41.47 | 39.16 |
| Bra026999.1-P | Field mustard | nucleus, plastid | 37.64 | 39.14 |
| KRH03976 | Soybean | mitochondrion, nucleus | 41.47 | 38.86 |
| CDY49199 | Canola | plastid | 38.92 | 38.61 |
| Bra027620.1-P | Field mustard | plastid | 38.92 | 38.61 |
| AT1G63100.2 | Thale cress | plastid | 40.35 | 38.45 |
| CDY47352 | Canola | plastid | 38.92 | 38.3 |
| CDY45974 | Canola | plastid | 39.39 | 38.29 |
| CDY70213 | Canola | plastid | 39.08 | 38.1 |
| GSMUA_Achr4P19750_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 45.77 | 33.29 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 19.46 | 31.12 |
| TraesCS5A01G511900.1 | Wheat | cytosol | 21.21 | 30.5 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 15.63 | 30.06 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 20.57 | 28.86 |
| TraesCS3A01G233000.1 | Wheat | plasma membrane | 22.65 | 28.34 |
| TraesCS1A01G413800.1 | Wheat | cytosol, nucleus, plastid | 21.53 | 28.01 |
| TraesCS2A01G200700.1 | Wheat | cytosol | 20.1 | 28.0 |
| TraesCS3A01G392600.1 | Wheat | cytosol | 21.05 | 27.62 |
| TraesCS3A01G392400.1 | Wheat | cytosol | 22.81 | 27.55 |
| TraesCS3A01G392500.1 | Wheat | cytosol | 22.49 | 27.27 |
| TraesCS7A01G382800.1 | Wheat | cytosol | 18.5 | 27.23 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 18.5 | 26.98 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 20.57 | 26.27 |
| TraesCS2A01G304000.1 | Wheat | cytosol, mitochondrion, nucleus | 19.94 | 26.04 |
| TraesCS4A01G260600.1 | Wheat | cytosol | 21.37 | 24.59 |
| TraesCS4A01G191300.1 | Wheat | cytosol | 24.08 | 24.47 |
| TraesCS5A01G144000.1 | Wheat | plastid | 24.4 | 23.61 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 20.73 | 23.42 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 22.97 | 23.23 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 16.27 | 22.87 |
| TraesCS2A01G096800.1 | Wheat | nucleus | 23.29 | 20.42 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G059000.1 | EnsemblPlantsGene:TraesCS7A01G059000 | InterPro:IPR005202 | InterPro:Scarecrow-like_28 | InterPro:TF_GRAS | ncoils:Coil |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF16 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 |
Description
No Description!
Coordinates
chr7A:+:28464562..28466445
Molecular Weight (calculated)
66010.7 Da
IEP (calculated)
6.694
GRAVY (calculated)
-0.225
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MLAGCSSLSS RHQMSTAQRL PCGFSKRGGR GDSAVPGAAP RGVPGGDGRG GNGTCSFRAH PAPPVTQAVS WGAKPEPSVV GDGGGREMRS RAVKRAHEGE
101: SAAEEYGAPA VRAKRTRMGA DGDEVWFHQS IAGPAAMMQV AAGEGGGEEE VAEEQKVFLV PSAAAFPHGM AAAAGPSSLA AAKQEEFSKS PSHSSSSSGT
201: DGGSSAMLPV EPAGVRSFVV PEAEREALEL VGALTACAEA LAGCQHDAAN YYLARLGETA SPSGPTPLHR VAACFAEALA LRAANMWPHV FDVTPPRELT
301: DAAFHDDDDA LALRVLNSVT PIPRFLHFTL NERLLRAFDG HDRVHIIDFD IKQGLQWPSL LQSLSTRTPQ PPAHVRITGV GSSRQELQDT GARLAHVAAG
401: LGLAFEFHAV VDRLEDVRLW MLHVKRGERV AVNCILAAHR LLRDETGGAL SDFLGLVRST GAAVLLLGEH EAAGLNAGRW EARFARALQH YAAAFDAVGA
501: AGLPPASAAR AKAEEMFARE IRNAVAFEGS DRSERHESFA GWRRRMEDGG FRSAGIGDRE AMQGRMIARM FAPGKYGVHP QGDGEGLTLW WLDTPLYTVT
601: AWTPAGDGAG GSATVSASTT ASHSLQS
101: SAAEEYGAPA VRAKRTRMGA DGDEVWFHQS IAGPAAMMQV AAGEGGGEEE VAEEQKVFLV PSAAAFPHGM AAAAGPSSLA AAKQEEFSKS PSHSSSSSGT
201: DGGSSAMLPV EPAGVRSFVV PEAEREALEL VGALTACAEA LAGCQHDAAN YYLARLGETA SPSGPTPLHR VAACFAEALA LRAANMWPHV FDVTPPRELT
301: DAAFHDDDDA LALRVLNSVT PIPRFLHFTL NERLLRAFDG HDRVHIIDFD IKQGLQWPSL LQSLSTRTPQ PPAHVRITGV GSSRQELQDT GARLAHVAAG
401: LGLAFEFHAV VDRLEDVRLW MLHVKRGERV AVNCILAAHR LLRDETGGAL SDFLGLVRST GAAVLLLGEH EAAGLNAGRW EARFARALQH YAAAFDAVGA
501: AGLPPASAAR AKAEEMFARE IRNAVAFEGS DRSERHESFA GWRRRMEDGG FRSAGIGDRE AMQGRMIARM FAPGKYGVHP QGDGEGLTLW WLDTPLYTVT
601: AWTPAGDGAG GSATVSASTT ASHSLQS
001: MLAGCSSSSL LSPTRRLRSE AVAATSATVS AHFPMNTQRL DLPCSSSFSR KETPSSRPLG RSISLDNSNN NNNKPIERKT KTSGCSLKQN IKLPPLATTR
101: GNGEGFSWNN DNNNRGKSLK RLAEEDESCL SRAKRTKCEN EGDDEEKVCF VPSEVISQPL PNWVDSVITE LAGIGDKDVE SSLPAAVKEA SGGSSTSASS
201: ESRSLSHRVP EPTNGSRNPY SHRGATEERT TGNINNNNNR NDLQRDFELV NLLTGCLDAI RSRNIAAINH FIARTGDLAS PRGRTPMTRL IAYYIEALAL
301: RVARMWPHIF HIAPPREFDR TVEDESGNAL RFLNQVTPIP KFIHFTANEM LLRAFEGKER VHIIDFDIKQ GLQWPSFFQS LASRINPPHH VRITGIGESK
401: LELNETGDRL HGFAEAMNLQ FEFHPVVDRL EDVRLWMLHV KEGESVAVNC VMQMHKTLYD GTGAAIRDFL GLIRSTNPIA LVLAEQEAEH NSEQLETRVC
501: NSLKYYSAMF DAIHTNLATD SLMRVKVEEM LFGREIRNIV ACEGSHRQER HVGFRHWRRM LEQLGFRSLG VSEREVLQSK MLLRMYGSDN EGFFNVERSD
601: EDNGGEGGRG GGVTLRWSEQ PLYTISAWTT GGN
101: GNGEGFSWNN DNNNRGKSLK RLAEEDESCL SRAKRTKCEN EGDDEEKVCF VPSEVISQPL PNWVDSVITE LAGIGDKDVE SSLPAAVKEA SGGSSTSASS
201: ESRSLSHRVP EPTNGSRNPY SHRGATEERT TGNINNNNNR NDLQRDFELV NLLTGCLDAI RSRNIAAINH FIARTGDLAS PRGRTPMTRL IAYYIEALAL
301: RVARMWPHIF HIAPPREFDR TVEDESGNAL RFLNQVTPIP KFIHFTANEM LLRAFEGKER VHIIDFDIKQ GLQWPSFFQS LASRINPPHH VRITGIGESK
401: LELNETGDRL HGFAEAMNLQ FEFHPVVDRL EDVRLWMLHV KEGESVAVNC VMQMHKTLYD GTGAAIRDFL GLIRSTNPIA LVLAEQEAEH NSEQLETRVC
501: NSLKYYSAMF DAIHTNLATD SLMRVKVEEM LFGREIRNIV ACEGSHRQER HVGFRHWRRM LEQLGFRSLG VSEREVLQSK MLLRMYGSDN EGFFNVERSD
601: EDNGGEGGRG GGVTLRWSEQ PLYTISAWTT GGN
Arabidopsis Description
SCL28Scarecrow-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.