Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G342800.1 | Wheat | cytosol | 90.14 | 89.32 |
| TraesCS4D01G338800.1 | Wheat | cytoskeleton, cytosol, peroxisome, plastid | 91.51 | 81.6 |
| TraesCS1A01G413800.1 | Wheat | cytosol, nucleus, plastid | 84.4 | 76.35 |
| HORVU1Hr1G090800.1 | Barley | mitochondrion | 82.8 | 67.35 |
| Os05t0574900-01 | Rice | plasma membrane | 53.44 | 46.6 |
| KRG92263 | Soybean | cytosol | 41.97 | 45.86 |
| TraesCS3A01G233000.1 | Wheat | plasma membrane | 49.77 | 43.31 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 29.82 | 39.88 |
| Zm00001d009646_P001 | Maize | plastid | 43.35 | 39.79 |
| KXG23987 | Sorghum | cytosol | 46.79 | 38.86 |
| KRH34544 | Soybean | cytosol | 41.05 | 36.68 |
| KRH54840 | Soybean | cytosol | 41.74 | 36.04 |
| KRH63032 | Soybean | cytosol | 41.51 | 35.98 |
| VIT_11s0016g04630.t01 | Wine grape | plastid | 41.74 | 34.21 |
| GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 42.43 | 30.28 |
| TraesCS3A01G487500.1 | Wheat | cytosol, plastid | 30.73 | 29.98 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 25.46 | 28.32 |
| TraesCS7A01G382800.1 | Wheat | cytosol | 26.83 | 27.46 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 37.84 | 26.61 |
| TraesCS2A01G532900.1 | Wheat | cytosol | 25.46 | 25.81 |
| TraesCS2A01G200700.1 | Wheat | cytosol | 25.92 | 25.11 |
| TraesCS3A01G392600.1 | Wheat | cytosol | 26.61 | 24.27 |
| TraesCS3A01G392400.1 | Wheat | cytosol | 28.21 | 23.7 |
| TraesCS2A01G304000.1 | Wheat | cytosol, mitochondrion, nucleus | 25.92 | 23.54 |
| TraesCS3A01G392500.1 | Wheat | cytosol | 27.75 | 23.4 |
| TraesCS5A01G135000.1 | Wheat | mitochondrion | 29.59 | 23.24 |
| TraesCS4A01G185900.1 | Wheat | cytosol | 22.94 | 22.42 |
| TraesCS4A01G260600.1 | Wheat | cytosol | 27.98 | 22.39 |
| TraesCS1A01G304000.1 | Wheat | peroxisome | 24.77 | 22.0 |
| TraesCS4A01G191300.1 | Wheat | cytosol | 30.96 | 21.88 |
| TraesCS7A01G059000.1 | Wheat | plastid | 30.5 | 21.21 |
| TraesCS4A01G430600.1 | Wheat | plastid | 30.05 | 21.09 |
| TraesCS5A01G144000.1 | Wheat | plastid | 30.96 | 20.83 |
| TraesCS2A01G096800.1 | Wheat | nucleus | 32.34 | 19.72 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G511900.1 | EnsemblPlantsGene:TraesCS5A01G511900 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF128 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:11.6.2.2 | MapMan:15.5.12 | : |
Description
No Description!
Coordinates
chr5A:+:675781056..675782366
Molecular Weight (calculated)
47213.3 Da
IEP (calculated)
6.982
GRAVY (calculated)
-0.036
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPPPVAEAT ARRCQEAENI AVYLIHVLHK CAETIEAGDY AAAAGKLAEA RTMLATSVST TTGIGRVASH FAAALAQRLF PASPQYSFAL DASTERAGEL
101: YRRFYDAGPY LKFAHFTANQ AILEAFEGCD RVHVVDLAIK QGMQWPALIQ ALSIRPGGPP SVRITGVGSA PGADEVGLRL AEFARTMNVP FSFQRVTDDS
201: LDQLQPWMFQ VLPGEAVAVN SICQLHRLLV NPDAASTSLP TPIDVVLGWI ASMQPRVFTV VEQEADHNKP RLVTRFDNAM FYYGSVLDSM EAMSVSRGGA
301: IGNGAGADAY VQREIFNIVC YEGSARTERH EPLAYWCARL WRTGLTHVPL GPSAAYQAAK FVRVFSGTGF RVQEIGGCLS LAWHDHPLFT VSVWSAMPAD
401: GAGTAKEHAD KHKLKMSIGE SSGAATCQTP RRSERA
101: YRRFYDAGPY LKFAHFTANQ AILEAFEGCD RVHVVDLAIK QGMQWPALIQ ALSIRPGGPP SVRITGVGSA PGADEVGLRL AEFARTMNVP FSFQRVTDDS
201: LDQLQPWMFQ VLPGEAVAVN SICQLHRLLV NPDAASTSLP TPIDVVLGWI ASMQPRVFTV VEQEADHNKP RLVTRFDNAM FYYGSVLDSM EAMSVSRGGA
301: IGNGAGADAY VQREIFNIVC YEGSARTERH EPLAYWCARL WRTGLTHVPL GPSAAYQAAK FVRVFSGTGF RVQEIGGCLS LAWHDHPLFT VSVWSAMPAD
401: GAGTAKEHAD KHKLKMSIGE SSGAATCQTP RRSERA
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.