Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G262400.1 | Wheat | mitochondrion, plastid | 89.88 | 95.65 |
| TraesCS3A01G233000.1 | Wheat | plasma membrane | 84.19 | 94.61 |
| TraesCS3D01G220100.3 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 83.66 | 87.71 |
| Os01t0646300-01 | Rice | cytosol | 72.11 | 82.02 |
| OQU87235 | Sorghum | extracellular | 41.39 | 78.98 |
| Zm00001d044065_P001 | Maize | cytosol | 63.06 | 74.74 |
| KRG92263 | Soybean | cytosol | 41.74 | 58.9 |
| KRH63032 | Soybean | cytosol | 43.52 | 48.71 |
| KRH34544 | Soybean | cytosol | 42.1 | 48.57 |
| KRH54840 | Soybean | cytosol | 43.52 | 48.51 |
| VIT_11s0016g04630.t01 | Wine grape | plastid | 44.05 | 46.62 |
| GSMUA_Achr6P34550_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 49.91 | 45.99 |
| HORVU1Hr1G090800.1 | Barley | mitochondrion | 40.5 | 42.54 |
| HORVU3Hr1G106260.1 | Barley | cytosol | 12.26 | 38.55 |
| HORVU4Hr1G006930.1 | Barley | nucleus | 38.19 | 34.79 |
| HORVU3Hr1G088820.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 15.45 | 33.46 |
| HORVU2Hr1G113490.1 | Barley | cytosol | 17.76 | 31.75 |
| HORVU2Hr1G113480.1 | Barley | cytosol | 17.76 | 31.75 |
| HORVU7Hr1G091000.1 | Barley | cytosol | 22.74 | 30.05 |
| HORVU0Hr1G003230.2 | Barley | mitochondrion | 24.51 | 29.81 |
| HORVU3Hr1G088780.2 | Barley | cytosol | 27.35 | 29.0 |
| HORVU1Hr1G069140.1 | Barley | cytosol | 23.27 | 28.05 |
| HORVU6Hr1G033280.1 | Barley | cytosol | 21.49 | 27.13 |
| HORVU0Hr1G004640.1 | Barley | mitochondrion, nucleus, plastid | 22.74 | 26.72 |
| HORVU4Hr1G026010.3 | Barley | cytosol | 20.78 | 26.23 |
| HORVU5Hr1G045920.2 | Barley | cytosol | 26.82 | 25.81 |
| HORVU2Hr1G113360.1 | Barley | cytosol | 21.67 | 25.68 |
| HORVU5Hr1G043310.1 | Barley | cytosol | 24.69 | 25.27 |
| HORVU7Hr1G010620.1 | Barley | cytosol | 25.22 | 25.22 |
| HORVU4Hr1G008930.3 | Barley | cytosol, mitochondrion | 15.63 | 24.93 |
| HORVU4Hr1G008980.3 | Barley | mitochondrion, nucleus | 22.2 | 22.6 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G058100.1 | EnsemblPlantsGene:HORVU3Hr1G058100 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF7 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI000B479B8C | UniProt:A0A287L6Q8 |
| MapMan:11.6.2.2 | MapMan:15.5.12 | MapMan:26.6.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:437413070..437415254
Molecular Weight (calculated)
59821.5 Da
IEP (calculated)
6.376
GRAVY (calculated)
-0.105
Length
563 amino acids
Sequence
(BLAST)
(BLAST)
001: PPLHVCARYP GLSDVTHSPP HSTTSTRVTP RPAKRARTPS HHFHPPTAHR FHSGVAQRSA GMAMGTFPFQ WPMDPAPAPT SSLDASLPPS LLPPPPAAVP
101: DDGAAYYAAA DMHASSMPDL APPFPSRDAV AAELAMRRAE EEVAGIRLVH LLMSCAGAVE AGDHALAAAH LADANASLAA LSTASGIGRV ALHFTDALSR
201: RLFRSPTTPP PTDAEHAFLY HHFYEACPYL KFAHFTANQA ILEAFHGCDT VHVIDFSLMQ GLQWPALIQA LALRPGGPPF LRITGIGPPS PPGRDELRDV
301: GLRLADLARS VRVRFSFRGV AANSLDEVHP WMLQIAPGEA VAVNSVLQLH RLLADSADQV PIDAVLDCVA SLQPKIFTVV EQEVDHNKPG FLDRFTEALF
401: YYSAVFDSLD AASANGTGNA MAEAYLQREI CDIVCNEGTA RMERHEPLSQ WRDRLGRAGL TAVPLGASAL RQARMLLGLF SGEGHSVEEA EGCLTLGWHG
501: RPLFSASAWR AAAVGCDADG EDNHTSNNTS NFSGSSGGGS DSNNSSSSNG KCSGVVGASS MFL
101: DDGAAYYAAA DMHASSMPDL APPFPSRDAV AAELAMRRAE EEVAGIRLVH LLMSCAGAVE AGDHALAAAH LADANASLAA LSTASGIGRV ALHFTDALSR
201: RLFRSPTTPP PTDAEHAFLY HHFYEACPYL KFAHFTANQA ILEAFHGCDT VHVIDFSLMQ GLQWPALIQA LALRPGGPPF LRITGIGPPS PPGRDELRDV
301: GLRLADLARS VRVRFSFRGV AANSLDEVHP WMLQIAPGEA VAVNSVLQLH RLLADSADQV PIDAVLDCVA SLQPKIFTVV EQEVDHNKPG FLDRFTEALF
401: YYSAVFDSLD AASANGTGNA MAEAYLQREI CDIVCNEGTA RMERHEPLSQ WRDRLGRAGL TAVPLGASAL RQARMLLGLF SGEGHSVEEA EGCLTLGWHG
501: RPLFSASAWR AAAVGCDADG EDNHTSNNTS NFSGSSGGGS DSNNSSSSNG KCSGVVGASS MFL
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.