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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G159500.1 Wheat cytosol 83.86 95.41
TraesCS6B01G191800.1 Wheat cytosol 84.08 94.94
TraesCS6D01G153000.1 Wheat cytosol 83.41 94.18
KXG29713 Sorghum cytosol 65.47 73.55
Os02t0197300-00 Rice cytosol 70.85 70.85
Zm00001d015815_P001 Maize cytosol 63.23 67.79
HORVU7Hr1G091000.1 Barley cytosol 57.62 60.33
GSMUA_Achr1P19470_001 Banana nucleus 42.38 49.35
GSMUA_AchrUn_... Banana cytosol 41.48 48.43
GSMUA_Achr7P16880_001 Banana cytosol 40.58 47.76
GSMUA_Achr1P09360_001 Banana cytosol 39.46 47.7
VIT_19s0015g01930.t01 Wine grape cytosol 41.48 44.79
Solyc07g066250.1.1 Tomato nucleus 39.01 40.65
PGSC0003DMT400057265 Potato nucleus, plastid 39.24 40.6
CDY50028 Canola nucleus, plastid 35.87 38.37
CDY54362 Canola plastid 35.87 38.0
Bra038002.1-P Field mustard nucleus, plastid 35.87 36.12
AT1G55580.1 Thale cress plastid 35.2 35.28
HORVU3Hr1G106260.1 Barley cytosol 13.9 34.64
HORVU2Hr1G113480.1 Barley cytosol 19.51 27.62
HORVU2Hr1G113490.1 Barley cytosol 19.51 27.62
HORVU3Hr1G088820.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.47 26.54
HORVU0Hr1G003230.2 Barley mitochondrion 27.35 26.35
HORVU1Hr1G069140.1 Barley cytosol 26.23 25.05
HORVU4Hr1G008930.3 Barley cytosol, mitochondrion 19.06 24.08
HORVU0Hr1G004640.1 Barley mitochondrion, nucleus, plastid 25.34 23.59
HORVU2Hr1G113360.1 Barley cytosol 23.77 22.32
HORVU4Hr1G008980.3 Barley mitochondrion, nucleus 26.91 21.7
HORVU3Hr1G058100.1 Barley plastid 27.13 21.49
HORVU1Hr1G090800.1 Barley mitochondrion 25.78 21.46
HORVU5Hr1G045920.2 Barley cytosol 28.03 21.37
HORVU7Hr1G010620.1 Barley cytosol 26.68 21.14
HORVU4Hr1G026010.3 Barley cytosol 20.4 20.4
HORVU5Hr1G043310.1 Barley cytosol 24.66 20.0
HORVU3Hr1G088780.2 Barley cytosol 22.65 19.02
HORVU4Hr1G006930.1 Barley nucleus 26.23 18.93
Protein Annotations
EnsemblPlants:HORVU6Hr1G033280.1EnsemblPlantsGene:HORVU6Hr1G033280GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRASPANTHER:PTHR31636
PANTHER:PTHR31636:SF49PFAM:PF03514PFscan:PS50985SEG:segUniParc:UPI000B464ED3UniProt:A0A287TVI7
MapMan:15.5.12:::::
Description
No Description!
Coordinates
chrchr6H:+:151045446..151046788
Molecular Weight (calculated)
46388.7 Da
IEP (calculated)
5.159
GRAVY (calculated)
0.005
Length
446 amino acids
Sequence
(BLAST)
001: ADDRSCPSVT EAAGAAASSE DAAATSASAL LLSRPRHALR PPPATAADAM LDPPEPDDDA AQPPRAPLAA ASPRGLVLAC ADLLHRGDLD GARRVAGAVL
101: SGADPRGDAA DRLAHHFARA LALRADEGRS SDGAPEAVGV GVGVAPASSA AHLAYNKIAP FLRFAHLTAN QAILEAAAGA RRVHIVDLDA AHGVQWPPLL
201: QAICDRADAA VGPPEVRITG AGPDIGVLLR TGDRLRAFAS SLNLPFRFHP LLLPCTAQLA ADPAACLELH PDETLAVNCV LFLHRLSGDG ELAAFLRWVR
301: SMNPAVVTIA EREGSASRGD DDDELPRRVA AAMDFYSAVF DALEATVPPG SAERLAVEQE ILGTEIEEVV AGPGGGGGRP RSFEAWTAAA RAAGLSPWPA
401: STFAVSQARL LLRLHYPSEG YAAEEARGAC FLGWQTRTLM SVSSWH
Best Arabidopsis Sequence Match ( AT1G55580.1 )
(BLAST)
001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
Arabidopsis Description
SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.