Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G159500.1 | Wheat | cytosol | 83.86 | 95.41 |
TraesCS6B01G191800.1 | Wheat | cytosol | 84.08 | 94.94 |
TraesCS6D01G153000.1 | Wheat | cytosol | 83.41 | 94.18 |
KXG29713 | Sorghum | cytosol | 65.47 | 73.55 |
Os02t0197300-00 | Rice | cytosol | 70.85 | 70.85 |
Zm00001d015815_P001 | Maize | cytosol | 63.23 | 67.79 |
HORVU7Hr1G091000.1 | Barley | cytosol | 57.62 | 60.33 |
GSMUA_Achr1P19470_001 | Banana | nucleus | 42.38 | 49.35 |
GSMUA_AchrUn_... | Banana | cytosol | 41.48 | 48.43 |
GSMUA_Achr7P16880_001 | Banana | cytosol | 40.58 | 47.76 |
GSMUA_Achr1P09360_001 | Banana | cytosol | 39.46 | 47.7 |
VIT_19s0015g01930.t01 | Wine grape | cytosol | 41.48 | 44.79 |
Solyc07g066250.1.1 | Tomato | nucleus | 39.01 | 40.65 |
PGSC0003DMT400057265 | Potato | nucleus, plastid | 39.24 | 40.6 |
CDY50028 | Canola | nucleus, plastid | 35.87 | 38.37 |
CDY54362 | Canola | plastid | 35.87 | 38.0 |
Bra038002.1-P | Field mustard | nucleus, plastid | 35.87 | 36.12 |
AT1G55580.1 | Thale cress | plastid | 35.2 | 35.28 |
HORVU3Hr1G106260.1 | Barley | cytosol | 13.9 | 34.64 |
HORVU2Hr1G113480.1 | Barley | cytosol | 19.51 | 27.62 |
HORVU2Hr1G113490.1 | Barley | cytosol | 19.51 | 27.62 |
HORVU3Hr1G088820.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 15.47 | 26.54 |
HORVU0Hr1G003230.2 | Barley | mitochondrion | 27.35 | 26.35 |
HORVU1Hr1G069140.1 | Barley | cytosol | 26.23 | 25.05 |
HORVU4Hr1G008930.3 | Barley | cytosol, mitochondrion | 19.06 | 24.08 |
HORVU0Hr1G004640.1 | Barley | mitochondrion, nucleus, plastid | 25.34 | 23.59 |
HORVU2Hr1G113360.1 | Barley | cytosol | 23.77 | 22.32 |
HORVU4Hr1G008980.3 | Barley | mitochondrion, nucleus | 26.91 | 21.7 |
HORVU3Hr1G058100.1 | Barley | plastid | 27.13 | 21.49 |
HORVU1Hr1G090800.1 | Barley | mitochondrion | 25.78 | 21.46 |
HORVU5Hr1G045920.2 | Barley | cytosol | 28.03 | 21.37 |
HORVU7Hr1G010620.1 | Barley | cytosol | 26.68 | 21.14 |
HORVU4Hr1G026010.3 | Barley | cytosol | 20.4 | 20.4 |
HORVU5Hr1G043310.1 | Barley | cytosol | 24.66 | 20.0 |
HORVU3Hr1G088780.2 | Barley | cytosol | 22.65 | 19.02 |
HORVU4Hr1G006930.1 | Barley | nucleus | 26.23 | 18.93 |
Protein Annotations
EnsemblPlants:HORVU6Hr1G033280.1 | EnsemblPlantsGene:HORVU6Hr1G033280 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
PANTHER:PTHR31636:SF49 | PFAM:PF03514 | PFscan:PS50985 | SEG:seg | UniParc:UPI000B464ED3 | UniProt:A0A287TVI7 |
MapMan:15.5.12 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:151045446..151046788
Molecular Weight (calculated)
46388.7 Da
IEP (calculated)
5.159
GRAVY (calculated)
0.005
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: ADDRSCPSVT EAAGAAASSE DAAATSASAL LLSRPRHALR PPPATAADAM LDPPEPDDDA AQPPRAPLAA ASPRGLVLAC ADLLHRGDLD GARRVAGAVL
101: SGADPRGDAA DRLAHHFARA LALRADEGRS SDGAPEAVGV GVGVAPASSA AHLAYNKIAP FLRFAHLTAN QAILEAAAGA RRVHIVDLDA AHGVQWPPLL
201: QAICDRADAA VGPPEVRITG AGPDIGVLLR TGDRLRAFAS SLNLPFRFHP LLLPCTAQLA ADPAACLELH PDETLAVNCV LFLHRLSGDG ELAAFLRWVR
301: SMNPAVVTIA EREGSASRGD DDDELPRRVA AAMDFYSAVF DALEATVPPG SAERLAVEQE ILGTEIEEVV AGPGGGGGRP RSFEAWTAAA RAAGLSPWPA
401: STFAVSQARL LLRLHYPSEG YAAEEARGAC FLGWQTRTLM SVSSWH
101: SGADPRGDAA DRLAHHFARA LALRADEGRS SDGAPEAVGV GVGVAPASSA AHLAYNKIAP FLRFAHLTAN QAILEAAAGA RRVHIVDLDA AHGVQWPPLL
201: QAICDRADAA VGPPEVRITG AGPDIGVLLR TGDRLRAFAS SLNLPFRFHP LLLPCTAQLA ADPAACLELH PDETLAVNCV LFLHRLSGDG ELAAFLRWVR
301: SMNPAVVTIA EREGSASRGD DDDELPRRVA AAMDFYSAVF DALEATVPPG SAERLAVEQE ILGTEIEEVV AGPGGGGGRP RSFEAWTAAA RAAGLSPWPA
401: STFAVSQARL LLRLHYPSEG YAAEEARGAC FLGWQTRTLM SVSSWH
001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
Arabidopsis Description
SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.