Factsheet for Os02t0197300-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G159500.1	Wheat	cytosol	67.94	77.3
TraesCS6B01G191800.1	Wheat	cytosol	67.71	76.46
TraesCS6D01G153000.1	Wheat	cytosol	67.49	76.2
KXG29713	Sorghum	cytosol	65.47	73.55
HORVU6Hr1G033280.1	Barley	cytosol	70.85	70.85
Zm00001d015815_P001	Maize	cytosol	63.23	67.79
Os06t0610350-01	Rice	cytosol	58.07	58.73
GSMUA_Achr1P09360_001	Banana	cytosol	39.01	47.15
GSMUA_Achr1P19470_001	Banana	nucleus	40.36	47.0
GSMUA_Achr7P16880_001	Banana	cytosol	39.69	46.7
GSMUA_AchrUn_...	Banana	cytosol	39.46	46.07
VIT_19s0015g01930.t01	Wine grape	cytosol	40.58	43.83
Solyc07g066250.1.1	Tomato	nucleus	38.34	39.95
PGSC0003DMT400057265	Potato	nucleus, plastid	38.56	39.91
CDY50028	Canola	nucleus, plastid	35.43	37.89
CDY54362	Canola	plastid	35.43	37.53
Bra038002.1-P	Field mustard	nucleus, plastid	35.43	35.67
AT1G55580.1	Thale cress	plastid	34.98	35.06
Os01t0948200-00	Rice	cytosol	28.25	28.51
Os07t0567700-02	Rice	cytosol	29.15	28.45
Os01t0646300-01	Rice	cytosol	26.91	24.24
Os11t0141500-00	Rice	cytosol	26.23	23.78
Os12t0138100-00	Rice	cytosol	26.23	23.78
Os05t0485400-00	Rice	peroxisome	26.46	23.6
Os06t0211500-00	Rice	cytosol	10.09	23.56
Os05t0574900-01	Rice	plasma membrane	25.11	22.4
Os04t0432100-00	Rice	nucleus	25.11	22.22
Os03t0723000-01	Rice	nucleus	27.35	21.11
Os12t0138200-00	Rice	cytosol	23.54	20.59
Os11t0141700-00	Rice	cytosol	23.32	20.55
Os11t0124300-01	Rice	nucleus, plastid	29.37	20.12
Os12t0122000-01	Rice	plastid	29.37	19.85
Os06t0127800-01	Rice	plastid	26.46	19.12
Os03t0707600-01	Rice	nucleus	26.23	18.72
Os05t0378200-00	Rice	cytosol	22.65	18.33
Os05t0378500-00	Rice	plastid	20.18	16.07
Os11t0141550-01	Rice	cytosol	0.67	2.33
Os12t0138166-00	Rice	endoplasmic reticulum, extracellular	0.9	1.13

Protein Annotations

MapMan:15.5.12	UniProt:A0A0P0VG96	ProteinID:BAS77468.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	EnsemblPlantsGene:Os02g0197300	EnsemblPlants:Os02t0197300-00	PFAM:PF03514
PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF49	InterPro:TF_GRAS	UniParc:UPI000393A7BF	SEG:seg

Description

Similar to Monoculm1. (Os02t0197300-00)

Coordinates

chr2:-:5451819..5453159

Molecular Weight (calculated)

46529.9 Da

IEP (calculated)

5.275

GRAVY (calculated)

-0.137

Length

446 amino acids

Sequence
(BLAST)

001: MLLCGRADDD PPCPDAAHAD AHDMLGSSPA RDRGGGDDAE ASEQPQPQPQ PPLSPRAGGG EARGLVLACA DLVHRGDLDG ARRVAEAVLA AADPRGEAGD
101: RLAHHFARAL LALRGGGKGG HGGGGGGVVP SSAAYLAYIK IAPFLRFAHL TANQAILEAA AADAGGAHRR VLHIVDLDAA HGVQWPPLLQ AIADRADPAV
201: GPPPEVRLTG AGTDRDVLLR TGDRLRAFSS SLNLPFRFHP LILPCTAELA ADPTAALELH PDETLAVNCV LFLHKLGGDG ELAAFLRWVK SMNPAVVTIA
301: EREGVLGGDV DDDNVPDELP RRVAAAMDYY SSVFDALEAT VPPASADRLA VEQEILSREI DAAVAAPGAG GGGRARDFDA WASAARAAGL APRPLSAFAA
401: SQARLLLRLH YPSEGYKADD DGGRGACFLR WQQRPLMSVS SWQPQP

Best Arabidopsis Sequence Match ( AT1G55580.1 )
(BLAST)

001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK

Arabidopsis Description

SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.