Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015815_P001 | Maize | cytosol | 89.67 | 85.58 |
| TraesCS6A01G159500.1 | Wheat | cytosol | 73.8 | 74.74 |
| TraesCS6B01G191800.1 | Wheat | cytosol | 73.8 | 74.18 |
| TraesCS6D01G153000.1 | Wheat | cytosol | 73.3 | 73.67 |
| HORVU6Hr1G033280.1 | Barley | cytosol | 73.55 | 65.47 |
| Os02t0197300-00 | Rice | cytosol | 73.55 | 65.47 |
| OQU76691 | Sorghum | cytosol, extracellular | 66.75 | 56.62 |
| GSMUA_Achr1P19470_001 | Banana | nucleus | 44.08 | 45.69 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.58 | 45.29 |
| GSMUA_Achr1P09360_001 | Banana | cytosol | 42.07 | 45.26 |
| VIT_19s0015g01930.t01 | Wine grape | cytosol | 45.59 | 43.83 |
| GSMUA_Achr7P16880_001 | Banana | cytosol | 41.81 | 43.8 |
| PGSC0003DMT400057265 | Potato | nucleus, plastid | 44.58 | 41.07 |
| Solyc07g066250.1.1 | Tomato | nucleus | 44.08 | 40.89 |
| CDY50028 | Canola | nucleus, plastid | 39.55 | 37.65 |
| CDY54362 | Canola | plastid | 39.55 | 37.29 |
| Bra038002.1-P | Field mustard | nucleus, plastid | 39.55 | 35.44 |
| AT1G55580.1 | Thale cress | plastid | 39.29 | 35.06 |
| OQU83473 | Sorghum | cytosol | 31.74 | 29.86 |
| OQU87235 | Sorghum | extracellular | 21.91 | 29.49 |
| EES02045 | Sorghum | cytosol, plastid | 30.98 | 26.8 |
| KXG36498 | Sorghum | cytosol, plastid | 30.73 | 26.52 |
| OQU81603 | Sorghum | cytosol | 23.43 | 25.98 |
| KXG37683 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 33.75 | 23.97 |
| EES09233 | Sorghum | cytosol | 28.21 | 23.0 |
| KXG22896 | Sorghum | cytosol, plasma membrane | 29.97 | 22.58 |
| EES18409 | Sorghum | cytosol | 27.71 | 22.31 |
| OQU77884 | Sorghum | plasma membrane | 23.93 | 20.88 |
| OQU77885 | Sorghum | cytosol | 24.69 | 20.33 |
| EES16518 | Sorghum | cytosol | 22.67 | 20.0 |
| KXG23987 | Sorghum | cytosol | 25.19 | 19.05 |
| KXG22822 | Sorghum | mitochondrion | 26.95 | 18.54 |
| EER93592 | Sorghum | cytosol | 29.22 | 18.5 |
| EES01920 | Sorghum | cytosol | 23.43 | 17.32 |
| EER87757 | Sorghum | mitochondrion | 27.71 | 17.27 |
| OQU82754 | Sorghum | plastid | 29.97 | 16.74 |
Protein Annotations
| MapMan:15.5.12 | UniProt:A0A194YNA5 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR005202 | EnsemblPlants:KXG29713 | ProteinID:KXG29713 |
| ProteinID:KXG29713.2 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF49 | EnsemblPlantsGene:SORBI_3004G080300 |
| InterPro:TF_GRAS | UniParc:UPI000B4246E3 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:6598882..6604462
Molecular Weight (calculated)
41777.5 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.025
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGAPGHDGH HAAERAHEHA AAQPSSPRGL VLATAGLIHR GDVDGARRAA DQVLSTADPR GDAADRLAHH FARALARRVA AAPAPAGGAP TATAYLAYNQ
101: IAPFLRFAHL TANQAILDAA ASGGARRLHI VDLDAAHGVQ WPPLLQAIAD RADPAVGPPE VRITGAGPDR DVLLRTGDRL RAFAGSLNLP FRFHPLLLPC
201: TAQLAADPAT GLELHPDETL AVNCVLFLHR LGGEGEVATF LKWVKSMNPA VVTIAEKEAS SSIGSDDDCP PPDDLPRRVA AAMGYYSAVF DALEATVPPG
301: SADRLLVENE VLGREIDAAL ALAPGRVGEH SWGFEAWASA ARAAGLSPRP LSAFAVSQAR LLLRLHYPSE GYVAEEARGA CFLGWQTRPL MSVSSWQ
101: IAPFLRFAHL TANQAILDAA ASGGARRLHI VDLDAAHGVQ WPPLLQAIAD RADPAVGPPE VRITGAGPDR DVLLRTGDRL RAFAGSLNLP FRFHPLLLPC
201: TAQLAADPAT GLELHPDETL AVNCVLFLHR LGGEGEVATF LKWVKSMNPA VVTIAEKEAS SSIGSDDDCP PPDDLPRRVA AAMGYYSAVF DALEATVPPG
301: SADRLLVENE VLGREIDAAL ALAPGRVGEH SWGFEAWASA ARAAGLSPRP LSAFAVSQAR LLLRLHYPSE GYVAEEARGA CFLGWQTRPL MSVSSWQ
001: MLTSFKSSSS SSEDATATTT ENPPPLCIAS SSAATSASHH LRRLLFTAAN FVSQSNFTAA QNLLSILSLN SSPHGDSTER LVHLFTKALS VRINRQQQDQ
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
101: TAETVATWTT NEMTMSNSTV FTSSVCKEQF LFRTKNNNSD FESCYYLWLN QLTPFIRFGH LTANQAILDA TETNDNGALH ILDLDISQGL QWPPLMQALA
201: ERSSNPSSPP PSLRITGCGR DVTGLNRTGD RLTRFADSLG LQFQFHTLVI VEEDLAGLLL QIRLLALSAV QGETIAVNCV HFLHKIFNDD GDMIGHFLSA
301: IKSLNSRIVT MAEREANHGD HSFLNRFSEA VDHYMAIFDS LEATLPPNSR ERLTLEQRWF GKEILDVVAA EETERKQRHR RFEIWEEMMK RFGFVNVPIG
401: SFALSQAKLL LRLHYPSEGY NLQFLNNSLF LGWQNRPLFS VSSWK
Arabidopsis Description
SCL18SCL18 [Source:UniProtKB/TrEMBL;Acc:A0A178WEV4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.