CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 2
extracellular 3
mitochondrion 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044065_P001	Maize	cytosol	91.19	56.63
Os01t0646300-01	Rice	cytosol	80.0	47.68
TraesCS3A01G233000.1	Wheat	plasma membrane	78.98	46.51
TraesCS3B01G262400.1	Wheat	mitochondrion, plastid	79.32	44.23
TraesCS3D01G220100.3	Wheat	cytosol, endoplasmic reticulum, plasma membrane	79.66	43.76
KRG92263	Soybean	cytosol	56.27	41.6
HORVU3Hr1G058100.1	Barley	plastid	78.98	41.39
KRH34544	Soybean	cytosol	55.93	33.81
KRH63032	Soybean	cytosol	56.61	33.2
KRH54840	Soybean	cytosol	55.59	32.48
VIT_11s0016g04630.t01	Wine grape	plastid	55.25	30.64
GSMUA_Achr6P34550_001	Banana	mitochondrion, nucleus, peroxisome, plastid	61.02	29.46
OQU83473	Sorghum	cytosol	39.66	27.73
KXG23987	Sorghum	cytosol	46.1	25.9
EES02045	Sorghum	cytosol, plastid	35.93	23.09
EER93592	Sorghum	cytosol	47.8	22.49
KXG29713	Sorghum	cytosol	29.49	21.91
KXG36498	Sorghum	cytosol, plastid	33.9	21.74
OQU81603	Sorghum	cytosol	25.76	21.23
EES09233	Sorghum	cytosol	33.22	20.12
EES16518	Sorghum	cytosol	29.15	19.11
KXG22896	Sorghum	cytosol, plasma membrane	33.9	18.98
OQU76691	Sorghum	cytosol, extracellular	29.15	18.38
OQU77884	Sorghum	plasma membrane	28.14	18.24
EES18409	Sorghum	cytosol	29.83	17.85
OQU77885	Sorghum	cytosol	28.47	17.43
EES01920	Sorghum	cytosol	31.19	17.13
KXG22822	Sorghum	mitochondrion	32.54	16.64
KXG37683	Sorghum	cytosol, mitochondrion, peroxisome, plastid	30.51	16.1
EER87757	Sorghum	mitochondrion	33.22	15.38
OQU82754	Sorghum	plastid	33.9	14.06

Protein Annotations

EnsemblPlants:OQU87235	EnsemblPlantsGene:SORBI_3003G237201	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF7	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU87235	ProteinID:OQU87235.1	SEG:seg
UniParc:UPI0009DC8839	UniProt:A0A1W0VYQ0	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:57644549..57646278

Molecular Weight (calculated)

31530.9 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.237

Length

295 amino acids

Sequence
(BLAST)

001: MQGLQWPALI QALALRPGGP PSLRLTGIGP PSPPGRDDLR DVGVRLADLA RSVRVHFSFR GVAANRLDEV RPWMLQVAQG EAVAVNSVLQ LHRLLADDAS
101: FSADDARPRA PIDAVLDCVA SVRPKVLTVV EQEADHNKPG FLDRFTEALF YYSAVFDSLD AASGGAGDAA AEAYLEREIC DIVCGEGADR RERHEPLWRW
201: RDRLGRAGLA AVPLGANALR QARMLVGLFS GEGHCVEEAE GCLTLGWHGR PLFSASAWRA AEENNQSDSC NADGSRSSGS GSGSGSEESN ISCSS

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.