Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025133_P001 | Maize | cytosol | 75.14 | 54.45 |
| Zm00001d003657_P001 | Maize | cytosol, mitochondrion, nucleus | 73.46 | 52.81 |
| TraesCS2A01G304000.1 | Wheat | cytosol, mitochondrion, nucleus | 62.85 | 46.88 |
| TraesCS2B01G320700.1 | Wheat | cytosol, mitochondrion, nucleus | 62.85 | 46.3 |
| TraesCS2D01G302600.1 | Wheat | cytosol, mitochondrion, nucleus | 61.45 | 45.45 |
| HORVU0Hr1G004640.1 | Barley | mitochondrion, nucleus, plastid | 60.61 | 45.3 |
| Os04t0432100-00 | Rice | nucleus | 63.13 | 44.84 |
| VIT_18s0076g00200.t01 | Wine grape | cytosol | 32.68 | 35.89 |
| KRH34954 | Soybean | cytosol | 40.5 | 35.8 |
| GSMUA_Achr6P17870_001 | Banana | cytosol | 41.9 | 33.63 |
| PGSC0003DMT400023877 | Potato | cytosol | 37.43 | 32.52 |
| GSMUA_Achr10P... | Banana | nucleus | 38.55 | 31.44 |
| KRG91825 | Soybean | nucleus | 40.78 | 31.4 |
| KRH08555 | Soybean | cytosol | 40.5 | 30.79 |
| KRH70202 | Soybean | cytosol | 39.39 | 29.62 |
| Solyc11g017100.1.1 | Tomato | cytosol | 36.59 | 27.52 |
| OQU87235 | Sorghum | extracellular | 21.23 | 25.76 |
| OQU83473 | Sorghum | cytosol | 29.33 | 24.88 |
| KXG29713 | Sorghum | cytosol | 25.98 | 23.43 |
| KXG36498 | Sorghum | cytosol, plastid | 29.33 | 22.83 |
| OQU76691 | Sorghum | cytosol, extracellular | 24.58 | 18.8 |
| KXG22896 | Sorghum | cytosol, plasma membrane | 27.37 | 18.6 |
| EES02045 | Sorghum | cytosol, plastid | 23.46 | 18.3 |
| KXG37683 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 25.98 | 16.64 |
| EES18409 | Sorghum | cytosol | 22.91 | 16.63 |
| EES09233 | Sorghum | cytosol | 21.79 | 16.02 |
| EES01920 | Sorghum | cytosol | 23.74 | 15.83 |
| KXG23987 | Sorghum | cytosol | 22.91 | 15.62 |
| EER93592 | Sorghum | cytosol | 26.82 | 15.31 |
| EES16518 | Sorghum | cytosol | 18.99 | 15.11 |
| OQU77884 | Sorghum | plasma membrane | 18.44 | 14.51 |
| EER87757 | Sorghum | mitochondrion | 25.42 | 14.29 |
| KXG22822 | Sorghum | mitochondrion | 22.91 | 14.21 |
| OQU82754 | Sorghum | plastid | 27.09 | 13.64 |
| OQU77885 | Sorghum | cytosol | 17.88 | 13.28 |
Protein Annotations
| EnsemblPlants:OQU81603 | EnsemblPlantsGene:SORBI_3006G083201 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF19 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:OQU81603 | ProteinID:OQU81603.1 | SEG:seg |
| UniParc:UPI000B8BB0DF | UniProt:A0A1Z5RCW4 | MapMan:15.5.12 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:45194966..45198151
Molecular Weight (calculated)
38769.3 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.343
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MFYQASPIYQ LAHFTANQAI VEAFESGGRR RLHVVDFDVS YGFQWPSLIQ SMSHAAASTS TSTCTTSSSS HDGGDGDCAE PPVSLRITGL GTNPDELRQT
101: EARLARFASG CPNLRFEFEG IVVVDDDGPD SGRRHERIKV DDDATVVVNL VFPAAAAHQS STTTSTRDEA CSSALARIRS LNPSLVFLVE KDGGGNATSR
201: GRRSSIVLPP FTASLRYFAA VFDSLHECLP ADSAERLAIE RNHLGAEISD AMASLADYNN NYGGGGDDHH MVELPTTSCW RQMMERAGFE RVELSSRTVS
301: QAKLLLKMKS GGGGGFRVMM EGEGGSSAMS LGWRDSVQLI TATGWRRRRR STNKPAFS
101: EARLARFASG CPNLRFEFEG IVVVDDDGPD SGRRHERIKV DDDATVVVNL VFPAAAAHQS STTTSTRDEA CSSALARIRS LNPSLVFLVE KDGGGNATSR
201: GRRSSIVLPP FTASLRYFAA VFDSLHECLP ADSAERLAIE RNHLGAEISD AMASLADYNN NYGGGGDDHH MVELPTTSCW RQMMERAGFE RVELSSRTVS
301: QAKLLLKMKS GGGGGFRVMM EGEGGSSAMS LGWRDSVQLI TATGWRRRRR STNKPAFS
001: MLAGCSSSSL LSPTRRLRSE AVAATSATVS AHFPMNTQRL DLPCSSSFSR KETPSSRPLG RSISLDNSNN NNNKPIERKT KTSGCSLKQN IKLPPLATTR
101: GNGEGFSWNN DNNNRGKSLK RLAEEDESCL SRAKRTKCEN EGDDEEKVCF VPSEVISQPL PNWVDSVITE LAGIGDKDVE SSLPAAVKEA SGGSSTSASS
201: ESRSLSHRVP EPTNGSRNPY SHRGATEERT TGNINNNNNR NDLQRDFELV NLLTGCLDAI RSRNIAAINH FIARTGDLAS PRGRTPMTRL IAYYIEALAL
301: RVARMWPHIF HIAPPREFDR TVEDESGNAL RFLNQVTPIP KFIHFTANEM LLRAFEGKER VHIIDFDIKQ GLQWPSFFQS LASRINPPHH VRITGIGESK
401: LELNETGDRL HGFAEAMNLQ FEFHPVVDRL EDVRLWMLHV KEGESVAVNC VMQMHKTLYD GTGAAIRDFL GLIRSTNPIA LVLAEQEAEH NSEQLETRVC
501: NSLKYYSAMF DAIHTNLATD SLMRVKVEEM LFGREIRNIV ACEGSHRQER HVGFRHWRRM LEQLGFRSLG VSEREVLQSK MLLRMYGSDN EGFFNVERSD
601: EDNGGEGGRG GGVTLRWSEQ PLYTISAWTT GGN
101: GNGEGFSWNN DNNNRGKSLK RLAEEDESCL SRAKRTKCEN EGDDEEKVCF VPSEVISQPL PNWVDSVITE LAGIGDKDVE SSLPAAVKEA SGGSSTSASS
201: ESRSLSHRVP EPTNGSRNPY SHRGATEERT TGNINNNNNR NDLQRDFELV NLLTGCLDAI RSRNIAAINH FIARTGDLAS PRGRTPMTRL IAYYIEALAL
301: RVARMWPHIF HIAPPREFDR TVEDESGNAL RFLNQVTPIP KFIHFTANEM LLRAFEGKER VHIIDFDIKQ GLQWPSFFQS LASRINPPHH VRITGIGESK
401: LELNETGDRL HGFAEAMNLQ FEFHPVVDRL EDVRLWMLHV KEGESVAVNC VMQMHKTLYD GTGAAIRDFL GLIRSTNPIA LVLAEQEAEH NSEQLETRVC
501: NSLKYYSAMF DAIHTNLATD SLMRVKVEEM LFGREIRNIV ACEGSHRQER HVGFRHWRRM LEQLGFRSLG VSEREVLQSK MLLRMYGSDN EGFFNVERSD
601: EDNGGEGGRG GGVTLRWSEQ PLYTISAWTT GGN
Arabidopsis Description
SCL28Scarecrow-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.