CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH70202	Soybean	cytosol	93.84	92.86
KRH34954	Soybean	cytosol	76.01	88.4
KRG91825	Soybean	nucleus	82.59	83.66
VIT_18s0076g00200.t01	Wine grape	cytosol	53.93	77.91
PGSC0003DMT400023877	Potato	cytosol	53.08	60.68
Solyc11g017100.1.1	Tomato	cytosol	56.48	55.88
GSMUA_Achr6P17870_001	Banana	cytosol	50.74	53.59
GSMUA_Achr10P...	Banana	nucleus	47.98	51.48
HORVU0Hr1G004640.1	Barley	mitochondrion, nucleus, plastid	41.4	40.71
OQU81603	Sorghum	cytosol	30.79	40.5
Zm00001d025133_P001	Maize	cytosol	41.4	39.47
TraesCS2A01G304000.1	Wheat	cytosol, mitochondrion, nucleus	39.92	39.17
TraesCS2B01G320700.1	Wheat	cytosol, mitochondrion, nucleus	40.34	39.09
Zm00001d003657_P001	Maize	cytosol, mitochondrion, nucleus	41.19	38.96
TraesCS2D01G302600.1	Wheat	cytosol, mitochondrion, nucleus	39.7	38.64
Os04t0432100-00	Rice	nucleus	39.49	36.9
KRH29015	Soybean	cytosol	20.17	33.33
KRH29089	Soybean	mitochondrion	26.96	28.73
KRG92263	Soybean	cytosol	23.57	27.82
KRH24117	Soybean	plastid	25.69	27.19
KRH57194	Soybean	cytosol	28.24	26.03
KRH03910	Soybean	cytosol	28.03	25.68
KRH24039	Soybean	cytosol	25.9	25.36
KRH29080	Soybean	cytosol	23.99	24.84
KRH77666	Soybean	endoplasmic reticulum, nucleus, peroxisome, plastid	24.42	24.73
KRH24106	Soybean	cytosol, nucleus, peroxisome	23.78	24.62
KRH42544	Soybean	cytosol, nucleus, plastid	26.96	24.56
KRH58636	Soybean	nucleus	26.96	24.28
KRH27822	Soybean	nucleus, plastid	24.2	24.1
KRH34544	Soybean	cytosol	24.2	23.36
KRH29971	Soybean	cytosol	21.66	23.08
KRH62871	Soybean	cytosol	21.66	23.02
KRH54840	Soybean	cytosol	24.63	22.97
KRH63032	Soybean	cytosol	24.42	22.86
KRH19587	Soybean	cytosol	25.05	22.43
KRH13057	Soybean	cytosol	26.33	22.34
KRG97933	Soybean	nucleus	27.18	21.92
KRH32212	Soybean	cytosol	24.84	21.79
KRH30942	Soybean	cytosol	27.39	21.68
KRH44884	Soybean	cytosol	19.75	21.48
KRG94590	Soybean	plastid	30.57	21.15
KRH06900	Soybean	plastid	30.15	20.7
KRH03976	Soybean	mitochondrion, nucleus	29.09	20.48
KRH57249	Soybean	plastid	28.66	20.33
KRH40615	Soybean	nucleus, plastid	29.72	17.01
KRH00551	Soybean	nucleus, plastid	29.72	16.63

Protein Annotations

EntrezGene:100798251	MapMan:15.5.12	EMBL:ACUP02010183	EnsemblPlantsGene:GLYMA_16G156700	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1MNY6	InterPro:IPR005202	EnsemblPlants:KRH08555
ProteinID:KRH08555	ProteinID:KRH08555.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF19
InterPro:TF_GRAS	UniParc:UPI000233E07B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:31681401..31683477

Molecular Weight (calculated)

53898.4 Da

IEP (calculated)

7.267

GRAVY (calculated)

-0.401

Length

471 amino acids

Sequence
(BLAST)

001: MEDSEEEELL NLTLSVDAGR KRRKKGRTRD SNNNNSNTNS VIIPIKSNEG MIFRLLQMRE LMLRQDHRIR KGVVEDGINN NKNGLPLIHL LLSTATAVDD
101: QRNYCAALEN LIDLYQTVSL TGDSVQRVVA YFADGLAARL LTKKSPFYDM LMEEPTSEEE FLAFTDLYRV SPYYQFAHFT ANQAILEAYE EEEERNNKAL
201: HVIDFDVSYG FQWPSLIQSL SEKATSGNRI SLRITGFGNN LKELQETEAR LVSFSKGFGN HLVFEFQGLL RGSSRVFNLR KKKNETVAVN LVSYLNTSSC
301: FMKASDTLGF VHSLSPSIVV LVKQEGSRSL KTFLSRFTES LHYFAAMFDS LDDCLPLEST ERLKIEKKVL GKEIKSMLNY DMDGVDYCPK YERMETWKGR
401: MENHGFVGRK ISSKCVIQAK LLLKMRTHYY PLQFEEEGGG GFRVSERDEG RVISLGWQNR FLLTVSSWQP V

Best Arabidopsis Sequence Match ( AT1G14920.1 )
(BLAST)

001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN

Arabidopsis Description

GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.