Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42544 | Soybean | cytosol, nucleus, plastid | 92.54 | 93.62 |
| AT1G14920.1 | Thale cress | nucleus | 69.98 | 68.67 |
| CDY36236 | Canola | cytosol, nucleus, plastid | 70.75 | 66.55 |
| CDY04092 | Canola | cytosol | 65.2 | 63.86 |
| AT2G01570.1 | Thale cress | mitochondrion, nucleus | 71.51 | 63.71 |
| Bra024875.1-P | Field mustard | nucleus | 69.6 | 63.53 |
| CDY17662 | Canola | cytosol, nucleus, plastid | 69.41 | 63.46 |
| CDY64837 | Canola | cytosol | 65.58 | 63.28 |
| VIT_01s0011g05260.t01 | Wine grape | cytosol | 70.36 | 62.37 |
| Bra017443.1-P | Field mustard | cytosol | 65.01 | 62.16 |
| TraesCS4A01G466700.1 | Wheat | cytosol, nucleus, peroxisome | 37.86 | 60.74 |
| GSMUA_Achr10P... | Banana | cytosol | 53.73 | 58.79 |
| GSMUA_Achr8P18250_001 | Banana | cytosol | 53.73 | 58.66 |
| KRG97933 | Soybean | nucleus | 65.01 | 58.22 |
| KRH30942 | Soybean | cytosol | 64.82 | 56.97 |
| HORVU4Hr1G006930.1 | Barley | nucleus | 62.52 | 52.91 |
| TraesCS4D01G040400.1 | Wheat | cytosol | 62.91 | 52.81 |
| TraesCS4A01G271000.1 | Wheat | cytosol | 62.52 | 52.74 |
| TraesCS4B01G043100.1 | Wheat | cytosol | 62.52 | 52.66 |
| Os03t0707600-01 | Rice | nucleus | 62.72 | 52.48 |
| Zm00001d033680_P001 | Maize | nucleus | 62.91 | 52.22 |
| EER93592 | Sorghum | cytosol | 62.33 | 51.99 |
| Zm00001d013465_P001 | Maize | cytosol | 61.95 | 51.84 |
| GSMUA_Achr1P21300_001 | Banana | nucleus | 49.52 | 50.19 |
| KRG92263 | Soybean | cytosol | 38.05 | 49.87 |
| KRH63032 | Soybean | cytosol | 46.46 | 48.31 |
| KRH54840 | Soybean | cytosol | 46.46 | 48.12 |
| KRH34544 | Soybean | cytosol | 44.74 | 47.95 |
| KRH29015 | Soybean | cytosol | 17.59 | 32.28 |
| KRH34954 | Soybean | cytosol | 23.71 | 30.62 |
| KRH29089 | Soybean | mitochondrion | 25.43 | 30.09 |
| KRH29080 | Soybean | cytosol | 25.43 | 29.23 |
| KRH24106 | Soybean | cytosol, nucleus, peroxisome | 25.24 | 29.01 |
| KRH24117 | Soybean | plastid | 23.9 | 28.09 |
| KRH44884 | Soybean | cytosol | 23.14 | 27.94 |
| KRH57194 | Soybean | cytosol | 27.15 | 27.79 |
| KRG91825 | Soybean | nucleus | 24.47 | 27.53 |
| KRH70202 | Soybean | cytosol | 25.05 | 27.52 |
| KRH03910 | Soybean | cytosol | 26.77 | 27.24 |
| KRH13057 | Soybean | cytosol | 28.68 | 27.03 |
| KRH08555 | Soybean | cytosol | 24.28 | 26.96 |
| KRH27822 | Soybean | nucleus, plastid | 24.28 | 26.85 |
| KRH77666 | Soybean | endoplasmic reticulum, nucleus, peroxisome, plastid | 23.71 | 26.67 |
| KRH62871 | Soybean | cytosol | 22.37 | 26.41 |
| KRH29971 | Soybean | cytosol | 21.8 | 25.79 |
| KRG94590 | Soybean | plastid | 33.08 | 25.4 |
| KRH06900 | Soybean | plastid | 33.08 | 25.22 |
| KRH19587 | Soybean | cytosol | 25.24 | 25.1 |
| KRH24039 | Soybean | cytosol | 22.75 | 24.74 |
| KRH32212 | Soybean | cytosol | 24.86 | 24.21 |
| KRH03976 | Soybean | mitochondrion, nucleus | 30.02 | 23.47 |
| KRH57249 | Soybean | plastid | 29.45 | 23.19 |
| KRH40615 | Soybean | nucleus, plastid | 27.92 | 17.74 |
| KRH00551 | Soybean | nucleus, plastid | 27.53 | 17.1 |
Protein Annotations
| Gene3D:1.10.10.1290 | MapMan:11.6.2.2 | MapMan:15.5.12 | MapMan:26.6.2.1 | EntrezGene:547718 | EMBL:ACUP02003279 |
| ncoils:Coil | InterPro:DELLA_N_sf | UniProt:E3NYP4 | EMBL:EU252573 | EnsemblPlantsGene:GLYMA_05G140400 | GO:GO:0000003 |
| GO:GO:0000989 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0003712 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009723 |
| GO:GO:0009737 | GO:GO:0009791 | GO:GO:0009863 | GO:GO:0009867 | GO:GO:0009938 | GO:GO:0009987 |
| GO:GO:0010187 | GO:GO:0042538 | GO:GO:0043565 | GO:GO:2000033 | GO:GO:2000377 | InterPro:IPR005202 |
| InterPro:IPR038088 | EnsemblPlants:KRH58636 | ProteinID:KRH58636 | ProteinID:KRH58636.1 | PFAM:PF03514 | PFAM:PF12041 |
| PFscan:PS50985 | PFscan:PS51257 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF47 | SMART:SM01129 | InterPro:TF_DELLA |
| InterPro:TF_DELLA_N | InterPro:TF_GRAS | UniParc:UPI0001E78C26 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:+:33323179..33326116
Molecular Weight (calculated)
57873.4 Da
IEP (calculated)
5.149
GRAVY (calculated)
-0.265
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRERQQLGS NAGTSSCGYS SGKSNLWEEE GGMDELLAVV GYKVRSSDMA EVAQKLERLE EAMGNVQDDL TDLSNDAVHY NPSDISNWLQ TMLSNFDPLP
101: SEEPEKDSAS SDYDLKAIPG KAIYGGGSDA LPNPKRVRTD ESTRAVVVVD LQENGIRLVH SLMACAEAVE NNNLAVAEAL VKQIGFLALS QVGAMRKVAT
201: YFAEALARRI YRVFPQQHSL SDSLQIHFYE TCPYLKFAHF TANQAILEAF QGKNRVHVID FGINQGMQWP ALMQALALRN DGPPVFRLTG IGPPAADNSD
301: HLQEVGWKLA QLAERIHVQF EYRGFVANSL ADLDASMLDL REDESVAVNS VFEFHKLLAR PGAVEKVLSV VRQIRPEILT VVEQEANHNG LSFVDRFTES
401: LHYYSTLFDS LEGSPVNPND KAMSEVYLGK QICNVVACEG MDRVERHETL NQWRNRFGST GFSPVHLGSN AYKQASMLLS LFGGGDGYRV EENNGCLMLG
501: WHTRPLIATS VWQLATKSVV AAH
101: SEEPEKDSAS SDYDLKAIPG KAIYGGGSDA LPNPKRVRTD ESTRAVVVVD LQENGIRLVH SLMACAEAVE NNNLAVAEAL VKQIGFLALS QVGAMRKVAT
201: YFAEALARRI YRVFPQQHSL SDSLQIHFYE TCPYLKFAHF TANQAILEAF QGKNRVHVID FGINQGMQWP ALMQALALRN DGPPVFRLTG IGPPAADNSD
301: HLQEVGWKLA QLAERIHVQF EYRGFVANSL ADLDASMLDL REDESVAVNS VFEFHKLLAR PGAVEKVLSV VRQIRPEILT VVEQEANHNG LSFVDRFTES
401: LHYYSTLFDS LEGSPVNPND KAMSEVYLGK QICNVVACEG MDRVERHETL NQWRNRFGST GFSPVHLGSN AYKQASMLLS LFGGGDGYRV EENNGCLMLG
501: WHTRPLIATS VWQLATKSVV AAH
001: MKRDHHHHHH QDKKTMMMNE EDDGNGMDEL LAVLGYKVRS SEMADVAQKL EQLEVMMSNV QEDDLSQLAT ETVHYNPAEL YTWLDSMLTD LNPPSSNAEY
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
101: DLKAIPGDAI LNQFAIDSAS SSNQGGGGDT YTTNKRLKCS NGVVETTTAT AESTRHVVLV DSQENGVRLV HALLACAEAV QKENLTVAEA LVKQIGFLAV
201: SQIGAMRKVA TYFAEALARR IYRLSPSQSP IDHSLSDTLQ MHFYETCPYL KFAHFTANQA ILEAFQGKKR VHVIDFSMSQ GLQWPALMQA LALRPGGPPV
301: FRLTGIGPPA PDNFDYLHEV GCKLAHLAEA IHVEFEYRGF VANTLADLDA SMLELRPSEI ESVAVNSVFE LHKLLGRPGA IDKVLGVVNQ IKPEIFTVVE
401: QESNHNSPIF LDRFTESLHY YSTLFDSLEG VPSGQDKVMS EVYLGKQICN VVACDGPDRV ERHETLSQWR NRFGSAGFAA AHIGSNAFKQ ASMLLALFNG
501: GEGYRVEESD GCLMLGWHTR PLIATSAWKL STN
Arabidopsis Description
GAIDELLA protein GAI [Source:UniProtKB/Swiss-Prot;Acc:Q9LQT8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.