CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01228
KRH18445
KRH44934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	KRH01228	AT3G29160.1	21798944
AT1G22160.1	KRH18445	AT3G29160.1	21798944
AT1G22160.1	KRH44934	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62389	Soybean	mitochondrion	68.83	77.94
CDX79242	Canola	mitochondrion	8.44	72.22
KRH16681	Soybean	mitochondrion	48.05	49.01
KRH18875	Soybean	mitochondrion	43.51	46.85
AT1G22160.1	Thale cress	mitochondrion, nucleus	42.86	44.9
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	44.81	44.81
CDX87485	Canola	cytosol, mitochondrion	44.81	44.81
CDX88407	Canola	cytosol, mitochondrion	44.16	44.16
GSMUA_Achr3P04440_001	Banana	mitochondrion	37.01	43.51
CDX68033	Canola	cytosol, mitochondrion	42.86	43.42
Bra031369.1-P	Field mustard	nucleus	44.16	43.31
CDY21344	Canola	nucleus	44.16	43.31
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	40.91	43.15
Bra003661.1-P	Field mustard	cytosol, mitochondrion	42.21	42.76
CDY01294	Canola	nucleus	42.86	41.77
CDY26845	Canola	mitochondrion	43.51	41.1
Bra008341.1-P	Field mustard	mitochondrion	43.51	41.1
GSMUA_Achr10P...	Banana	nucleus	38.96	40.82
CDY14641	Canola	mitochondrion	42.86	40.49
CDY38242	Canola	mitochondrion, nucleus	40.91	40.13
CDY00425	Canola	nucleus	40.91	39.87
PGSC0003DMT400022055	Potato	mitochondrion	35.71	39.86
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	35.71	39.86
AT1G78020.1	Thale cress	mitochondrion	41.56	39.51
CDX79243	Canola	cytosol, plastid	28.57	39.29
Bra012309.1-P	Field mustard	nucleus	40.26	39.24
GSMUA_Achr7P17710_001	Banana	mitochondrion	38.31	38.82
TraesCS7A01G182100.1	Wheat	mitochondrion	32.47	36.23
GSMUA_Achr6P02010_001	Banana	mitochondrion, nucleus	36.36	36.13
GSMUA_Achr5P24390_001	Banana	cytosol	29.22	35.71
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	47.4	35.1
TraesCS7B01G086900.1	Wheat	mitochondrion, nucleus	31.82	35.0
TraesCS7D01G183500.1	Wheat	mitochondrion	31.82	34.51
GSMUA_Achr4P01820_001	Banana	mitochondrion	35.71	34.16
OQU76080	Sorghum	cytosol	29.22	33.58
Zm00001d020264_P001	Maize	nucleus	38.96	33.15
Os06t0223700-01	Rice	cytosol, mitochondrion, nucleus, plastid	30.52	33.1
TraesCS5D01G200000.1	Wheat	cytosol	34.42	31.93
TraesCS5A01G191000.1	Wheat	cytosol	34.42	31.93
Os09t0367900-02	Rice	cytosol	35.71	31.25
Zm00001d005657_P002	Maize	nucleus	35.71	31.07
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	31.17	30.97
KRH31273	Soybean	mitochondrion	37.66	30.85
Zm00001d044849_P001	Maize	plastid	30.52	29.94
Zm00001d018076_P001	Maize	plastid	31.17	29.81
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	30.52	29.56
Zm00001d052234_P001	Maize	plastid	29.22	28.66
Os02t0751300-01	Rice	mitochondrion	27.27	28.57
TraesCS6B01G331900.1	Wheat	mitochondrion	28.57	28.57
KXG30742	Sorghum	plastid	29.87	28.4
KRG97604	Soybean	nucleus	37.01	27.94
Os08t0407600-01	Rice	mitochondrion	35.71	27.64
Zm00001d032292_P001	Maize	mitochondrion	33.77	27.51
EER96652	Sorghum	nucleus	35.06	27.41
TraesCS6D01G282200.1	Wheat	mitochondrion	26.62	26.62
EES14968	Sorghum	mitochondrion	33.12	25.63
TraesCS6A01G302700.1	Wheat	mitochondrion	26.62	25.62
HORVU6Hr1G073620.1	Barley	mitochondrion	22.08	25.19
Zm00001d050285_P001	Maize	mitochondrion	29.87	24.86
TraesCS6D01G276200.1	Wheat	mitochondrion	22.08	22.97
TraesCS6A01G295600.1	Wheat	mitochondrion	22.08	22.97
TraesCS6A01G295900.1	Wheat	mitochondrion	20.78	22.7
TraesCS6D01G276300.1	Wheat	mitochondrion	20.78	22.7
TraesCS6A01G295800.1	Wheat	mitochondrion	20.78	22.7
TraesCS6B01G325800.1	Wheat	nucleus, plastid	22.08	20.99
TraesCS6B01G325700.1	Wheat	mitochondrion	18.83	19.21
HORVU6Hr1G075130.1	Barley	mitochondrion	18.18	17.28

Protein Annotations

EMBL:ACUP02003450	EnsemblPlants:KRH53114	EnsemblPlantsGene:GLYMA_06G105800	EntrezGene:100803140	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF74	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH53114	ProteinID:KRH53114.1
SEG:seg	UniParc:UPI00023395AF	UniProt:I1KA17	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr6:+:8462899..8464185

Molecular Weight (calculated)

17211.6 Da

IEP (calculated)

10.119

GRAVY (calculated)

-0.806

Length

154 amino acids

Sequence
(BLAST)

001: MLLGKRPRPP IMKRTTSMSE ITFDLNTSLD DDPNNSVKGP GGDGPPVGLN GLDQNRVWAM VSPRNHHRRQ YSEDTPGFLR VCFLCKRRLV PGRDIFMYKG
101: DSAFCSSECR EQQMKHDERK DKCRVASSKK QVAAKPNSGS QVTTNTKGET VVAL

Best Arabidopsis Sequence Match ( AT1G78020.1 )
(BLAST)

001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV

Arabidopsis Description

F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.