CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01228
KRH18445
KRH44934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	KRH01228	AT3G29160.1	21798944
AT1G22160.1	KRH18445	AT3G29160.1	21798944
AT1G22160.1	KRH44934	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79242	Canola	mitochondrion	9.56	72.22
KRH53114	Soybean	nucleus	77.94	68.83
KRH16681	Soybean	mitochondrion	55.88	50.33
KRH18875	Soybean	mitochondrion	50.0	47.55
GSMUA_Achr3P04440_001	Banana	mitochondrion	43.38	45.04
AT1G22160.1	Thale cress	mitochondrion, nucleus	47.06	43.54
Bra031369.1-P	Field mustard	nucleus	49.26	42.68
CDY21344	Canola	nucleus	49.26	42.68
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	45.59	42.47
CDY01294	Canola	nucleus	47.79	41.14
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	46.32	40.91
CDX87485	Canola	cytosol, mitochondrion	46.32	40.91
CDX88407	Canola	cytosol, mitochondrion	46.32	40.91
PGSC0003DMT400022055	Potato	mitochondrion	40.44	39.86
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	40.44	39.86
CDY38242	Canola	mitochondrion, nucleus	45.59	39.49
CDX68033	Canola	cytosol, mitochondrion	44.12	39.47
AT1G78020.1	Thale cress	mitochondrion	46.32	38.89
Bra003661.1-P	Field mustard	cytosol, mitochondrion	43.38	38.82
CDY26845	Canola	mitochondrion	46.32	38.65
Bra008341.1-P	Field mustard	mitochondrion	46.32	38.65
Bra012309.1-P	Field mustard	nucleus	44.85	38.61
CDY00425	Canola	nucleus	44.85	38.61
CDX79243	Canola	cytosol, plastid	31.62	38.39
CDY14641	Canola	mitochondrion	45.59	38.04
GSMUA_Achr10P...	Banana	nucleus	40.44	37.41
TraesCS7A01G182100.1	Wheat	mitochondrion	37.5	36.96
GSMUA_Achr6P02010_001	Banana	mitochondrion, nucleus	41.91	36.77
TraesCS7B01G086900.1	Wheat	mitochondrion, nucleus	37.5	36.43
TraesCS7D01G183500.1	Wheat	mitochondrion	37.5	35.92
GSMUA_Achr7P17710_001	Banana	mitochondrion	39.71	35.53
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	51.47	33.65
GSMUA_Achr4P01820_001	Banana	mitochondrion	38.24	32.3
OQU76080	Sorghum	cytosol	31.62	32.09
Zm00001d020264_P001	Maize	nucleus	42.65	32.04
GSMUA_Achr5P24390_001	Banana	cytosol	29.41	31.75
Os06t0223700-01	Rice	cytosol, mitochondrion, nucleus, plastid	33.09	31.69
KRH31273	Soybean	mitochondrion	42.65	30.85
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	36.03	30.82
Zm00001d005657_P002	Maize	nucleus	38.97	29.94
Zm00001d044849_P001	Maize	plastid	34.56	29.94
Os09t0367900-02	Rice	cytosol	38.24	29.55
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	33.09	29.03
Os02t0751300-01	Rice	mitochondrion	30.88	28.57
Zm00001d018076_P001	Maize	plastid	33.82	28.57
KRG97604	Soybean	nucleus	42.65	28.43
TraesCS5A01G191000.1	Wheat	cytosol	34.56	28.31
TraesCS5D01G200000.1	Wheat	cytosol	34.56	28.31
Zm00001d052234_P001	Maize	plastid	32.35	28.03
KXG30742	Sorghum	plastid	32.35	27.16
EER96652	Sorghum	nucleus	38.97	26.9
Zm00001d032292_P001	Maize	mitochondrion	36.76	26.45
TraesCS6B01G331900.1	Wheat	mitochondrion	29.41	25.97
Os08t0407600-01	Rice	mitochondrion	36.76	25.13
EES14968	Sorghum	mitochondrion	36.76	25.13
HORVU6Hr1G073620.1	Barley	mitochondrion	24.26	24.44
TraesCS6D01G282200.1	Wheat	mitochondrion	27.21	24.03
Zm00001d050285_P001	Maize	mitochondrion	31.62	23.24
TraesCS6A01G302700.1	Wheat	mitochondrion	26.47	22.5
TraesCS6A01G295800.1	Wheat	mitochondrion	22.06	21.28
TraesCS6D01G276200.1	Wheat	mitochondrion	22.79	20.95
TraesCS6D01G276300.1	Wheat	mitochondrion	21.32	20.57
TraesCS6A01G295900.1	Wheat	mitochondrion	21.32	20.57
TraesCS6A01G295600.1	Wheat	mitochondrion	22.06	20.27
TraesCS6B01G325800.1	Wheat	nucleus, plastid	23.53	19.75
TraesCS6B01G325700.1	Wheat	mitochondrion	20.59	18.54
HORVU6Hr1G075130.1	Barley	mitochondrion	19.12	16.05

Protein Annotations

EMBL:ACUP02002241	EMBL:BT091820	EnsemblPlants:KRH62389	EnsemblPlantsGene:GLYMA_04G104800	EntrezGene:100527013	InterPro:IPR007650
InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF74	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH62389
ProteinID:KRH62389.1	SEG:seg	UniParc:UPI0001B1528B	UniProt:C6T311	MapMan:27.3.3	:

Description

hypothetical protein

Coordinates

chr4:+:9961940..9963156

Molecular Weight (calculated)

15436.5 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.818

Length

136 amino acids

Sequence
(BLAST)

001: MLLGKRPRPP IMKRTTSMSE ITFDLNTTLD DDPNNPVKGP GGNQNRVWAM VSPRNHSEDT TPDFLRVCFL CKRRLVPARD IFMYKGDSAF CSSECREQLM
101: KQDERKDKYR VGSKKQVAEK PNSGSQVNKG ETVVAL

Best Arabidopsis Sequence Match ( AT1G22160.1 )
(BLAST)

001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV

Arabidopsis Description

Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.