Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G65040.1 | KRH01228 | AT3G29160.1 | 21798944 |
| AT5G65040.1 | KRH18445 | AT3G29160.1 | 21798944 |
| AT5G65040.1 | KRH44934 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31273 | Soybean | mitochondrion | 55.39 | 60.11 |
| VIT_00s0357g00010.t01 | Wine grape | mitochondrion | 22.06 | 55.56 |
| CDY08827 | Canola | mitochondrion | 24.51 | 45.87 |
| CDY31291 | Canola | cytosol | 25.0 | 44.35 |
| CDY33991 | Canola | mitochondrion | 25.0 | 44.35 |
| KRH18875 | Soybean | mitochondrion | 30.39 | 43.36 |
| KRH62389 | Soybean | mitochondrion | 28.43 | 42.65 |
| AT5G65040.1 | Thale cress | mitochondrion | 23.53 | 42.48 |
| Bra031889.1-P | Field mustard | cytosol | 20.59 | 42.42 |
| KRH16681 | Soybean | mitochondrion | 30.39 | 41.06 |
| KRH53114 | Soybean | nucleus | 27.94 | 37.01 |
| Solyc04g054760.2.1 | Tomato | mitochondrion, nucleus | 27.45 | 35.9 |
| PGSC0003DMT400017167 | Potato | mitochondrion | 26.96 | 35.03 |
| PGSC0003DMT400056164 | Potato | nucleus | 24.51 | 34.48 |
| Solyc05g051860.2.1 | Tomato | nucleus | 25.0 | 34.23 |
| VIT_00s1003g00010.t01 | Wine grape | nucleus | 30.39 | 32.8 |
Protein Annotations
| EMBL:ACUP02010802 | EMBL:BT096413 | EnsemblPlants:KRG97604 | EnsemblPlantsGene:GLYMA_18G018800 | EntrezGene:100775423 | InterPro:IPR007650 |
| InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:KRG97604 |
| ProteinID:KRG97604.1 | SEG:seg | UniParc:UPI0001B166E0 | UniProt:C6TFM4 | MapMan:27.3.3 | : |
Description
hypothetical protein
Coordinates
chr18:-:1375308..1377165
Molecular Weight (calculated)
22862.1 Da
IEP (calculated)
8.826
GRAVY (calculated)
-0.837
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKKIEEEQD MLLGKRPRAP IMKRTTSMSG GLAVETKTTN EEVVVMSDSQ HDEVAANNKL VDPHVVVAMG TPNNNEFVPD HTKHVSEAKG SYVYADRLMG
101: INMSMPLSPT TSNNHRHTHI HNHTTNTNNI HTTSHFLRTC GLCNCHLAPG RDIYMYRGDA AFCSLECREK QMKQDQRKEK WKAGSNKEHH RASPPGATAK
201: ASCN
101: INMSMPLSPT TSNNHRHTHI HNHTTNTNNI HTTSHFLRTC GLCNCHLAPG RDIYMYRGDA AFCSLECREK QMKQDQRKEK WKAGSNKEHH RASPPGATAK
201: ASCN
001: MLLGNRPRPQ MQRTASITRI TIEVDGDQTA GQDSDVSMTV VDGGENYAQR FLSPVNHQRN ERKYGGRSSP SSFLVNCGFC KRGLAPGRDI YMYKGDAAFC
101: SIECREQQME HDEGKTRNRV VLSPSK
101: SIECREQQME HDEGKTRNRV VLSPSK
Arabidopsis Description
Protein of unknown function (DUF581) [Source:TAIR;Acc:AT4G39795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.