CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 5
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH01228
KRH18445
KRH44934

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	KRH01228	AT3G29160.1	21798944
AT1G22160.1	KRH18445	AT3G29160.1	21798944
AT1G22160.1	KRH44934	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH18875	Soybean	mitochondrion	78.81	83.22
CDX79242	Canola	mitochondrion	9.27	77.78
KRH62389	Soybean	mitochondrion	50.33	55.88
AT1G22160.1	Thale cress	mitochondrion, nucleus	47.68	48.98
CDX79243	Canola	cytosol, plastid	35.76	48.21
GSMUA_Achr3P04440_001	Banana	mitochondrion	41.72	48.09
KRH53114	Soybean	nucleus	49.01	48.05
PGSC0003DMT400022055	Potato	mitochondrion	43.71	47.83
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	43.05	47.1
CDX68033	Canola	cytosol, mitochondrion	47.02	46.71
Bra003661.1-P	Field mustard	cytosol, mitochondrion	46.36	46.05
CDY26845	Canola	mitochondrion	49.67	46.01
Bra008341.1-P	Field mustard	mitochondrion	49.67	46.01
CDX87485	Canola	cytosol, mitochondrion	46.36	45.45
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	46.36	45.45
Bra031369.1-P	Field mustard	nucleus	47.02	45.22
CDY21344	Canola	nucleus	47.02	45.22
Bra012309.1-P	Field mustard	nucleus	47.02	44.94
CDX88407	Canola	cytosol, mitochondrion	45.7	44.81
CDY14641	Canola	mitochondrion	48.34	44.79
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	43.05	44.52
AT1G78020.1	Thale cress	mitochondrion	47.68	44.44
CDY00425	Canola	nucleus	46.36	44.3
TraesCS7A01G182100.1	Wheat	mitochondrion	40.4	44.2
GSMUA_Achr7P17710_001	Banana	mitochondrion	43.71	43.42
CDY01294	Canola	nucleus	45.03	43.04
GSMUA_Achr6P02010_001	Banana	mitochondrion, nucleus	43.71	42.58
GSMUA_Achr10P...	Banana	nucleus	41.06	42.18
TraesCS7B01G086900.1	Wheat	mitochondrion, nucleus	39.07	42.14
CDY38242	Canola	mitochondrion, nucleus	43.71	42.04
TraesCS7D01G183500.1	Wheat	mitochondrion	37.75	40.14
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	54.3	39.42
GSMUA_Achr5P24390_001	Banana	cytosol	32.45	38.89
OQU76080	Sorghum	cytosol	33.11	37.31
GSMUA_Achr4P01820_001	Banana	mitochondrion	39.74	37.27
Os06t0223700-01	Rice	cytosol, mitochondrion, nucleus, plastid	33.77	35.92
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	35.76	34.84
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	35.76	33.96
Zm00001d020264_P001	Maize	nucleus	40.4	33.7
Zm00001d050285_P001	Maize	mitochondrion	40.4	32.97
Os02t0751300-01	Rice	mitochondrion	31.79	32.65
Zm00001d044849_P001	Maize	plastid	33.77	32.48
Zm00001d018076_P001	Maize	plastid	34.44	32.3
Zm00001d052234_P001	Maize	plastid	33.11	31.85
Zm00001d032292_P001	Maize	mitochondrion	39.74	31.75
KRH31273	Soybean	mitochondrion	39.07	31.38
Os09t0367900-02	Rice	cytosol	36.42	31.25
EES14968	Sorghum	mitochondrion	41.06	31.16
Zm00001d005657_P002	Maize	nucleus	36.42	31.07
TraesCS5D01G200000.1	Wheat	cytosol	33.77	30.72
TraesCS5A01G191000.1	Wheat	cytosol	33.77	30.72
KRG97604	Soybean	nucleus	41.06	30.39
Os08t0407600-01	Rice	mitochondrion	39.74	30.15
EER96652	Sorghum	nucleus	38.41	29.44
KXG30742	Sorghum	plastid	31.13	29.01
TraesCS6B01G331900.1	Wheat	mitochondrion	27.81	27.27
HORVU6Hr1G073620.1	Barley	mitochondrion	23.84	26.67
TraesCS6D01G282200.1	Wheat	mitochondrion	25.83	25.32
TraesCS6A01G295900.1	Wheat	mitochondrion	23.18	24.82
TraesCS6B01G325800.1	Wheat	nucleus, plastid	26.49	24.69
TraesCS6A01G302700.1	Wheat	mitochondrion	25.83	24.38
TraesCS6D01G276300.1	Wheat	mitochondrion	22.52	24.11
TraesCS6B01G325700.1	Wheat	mitochondrion	23.84	23.84
TraesCS6A01G295600.1	Wheat	mitochondrion	23.18	23.65
TraesCS6D01G276200.1	Wheat	mitochondrion	22.52	22.97
TraesCS6A01G295800.1	Wheat	mitochondrion	21.19	22.7
HORVU6Hr1G075130.1	Barley	mitochondrion	19.87	18.52

Protein Annotations

EMBL:ACUP02008977	EnsemblPlants:KRH16681	EnsemblPlantsGene:GLYMA_14G170100	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF74	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH16681	ProteinID:KRH16681.1	SEG:seg
UniParc:UPI00029640F5	UniProt:K7M7J8	MapMan:27.3.3	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:42070014..42071182

Molecular Weight (calculated)

16360.8 Da

IEP (calculated)

10.189

GRAVY (calculated)

-0.427

Length

151 amino acids

Sequence
(BLAST)

001: MLLGKRPRPP MKRTTSMSEM TLDLNTAAAA DAAANQQRSG VGPGAAADQT TRMLATPKIL RRHSSDFGDT PPFLRACSLC KRCLVPGHDI YMYRGDNAFC
101: SLECRQQQMN QDERKEKFVM ASKKKVVATP PSGSQVAVAT ATKGETTVVA L

Best Arabidopsis Sequence Match ( AT1G78020.1 )
(BLAST)

001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV

Arabidopsis Description

F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.