Factsheet for GSMUA_Achr6P02010_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	GSMUA_Achr10P...	AT3G29160.1	21798944
AT1G22160.1	GSMUA_AchrUn_...	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79242	Canola	mitochondrion	8.39	72.22
GSMUA_Achr3P04440_001	Banana	mitochondrion	58.71	69.47
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	57.42	60.96
GSMUA_Achr4P01820_001	Banana	mitochondrion	58.06	55.9
GSMUA_Achr7P17710_001	Banana	mitochondrion	51.61	52.63
GSMUA_Achr10P...	Banana	nucleus	47.1	49.66
KRH18875	Soybean	mitochondrion	43.23	46.85
Os06t0223700-01	Rice	cytosol, mitochondrion, nucleus, plastid	42.58	46.48
TraesCS7B01G086900.1	Wheat	mitochondrion, nucleus	41.94	46.43
TraesCS7A01G182100.1	Wheat	mitochondrion	40.0	44.93
TraesCS7D01G183500.1	Wheat	mitochondrion	40.65	44.37
KRH16681	Soybean	mitochondrion	42.58	43.71
OQU76080	Sorghum	cytosol	37.42	43.28
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	43.23	43.23
GSMUA_Achr5P24390_001	Banana	cytosol	34.19	42.06
KRH62389	Soybean	mitochondrion	36.77	41.91
Solyc04g072780.2.1	Tomato	nucleus	45.16	41.67
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	42.58	41.51
PGSC0003DMT400024491	Potato	nucleus	43.87	41.21
Zm00001d020264_P001	Maize	nucleus	47.1	40.33
Zm00001d052234_P001	Maize	plastid	40.65	40.13
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	35.48	39.86
PGSC0003DMT400022055	Potato	mitochondrion	35.48	39.86
Zm00001d032292_P001	Maize	mitochondrion	48.39	39.68
CDX79243	Canola	cytosol, plastid	28.39	39.29
Os09t0367900-02	Rice	cytosol	44.52	39.2
Zm00001d005657_P002	Maize	nucleus	43.87	38.42
TraesCS5D01G200000.1	Wheat	cytosol	40.65	37.95
Zm00001d018076_P001	Maize	plastid	39.35	37.89
AT1G78020.1	Thale cress	mitochondrion	39.35	37.65
AT1G22160.1	Thale cress	mitochondrion, nucleus	35.48	37.41
TraesCS5A01G191000.1	Wheat	cytosol	40.0	37.35
Zm00001d050285_P001	Maize	mitochondrion	44.52	37.3
Os08t0407600-01	Rice	mitochondrion	47.74	37.19
CDX88407	Canola	cytosol, mitochondrion	36.77	37.01
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	36.77	37.01
EER96652	Sorghum	nucleus	46.45	36.55
KXG30742	Sorghum	plastid	38.06	36.42
CDX87485	Canola	cytosol, mitochondrion	36.13	36.36
KRH53114	Soybean	nucleus	36.13	36.36
CDY01294	Canola	nucleus	36.77	36.08
EES14968	Sorghum	mitochondrion	45.81	35.68
CDY21344	Canola	nucleus	36.13	35.67
Zm00001d044849_P001	Maize	plastid	36.13	35.67
Bra031369.1-P	Field mustard	nucleus	36.13	35.67
CDY26845	Canola	mitochondrion	37.42	35.58
Bra008341.1-P	Field mustard	mitochondrion	37.42	35.58
CDX68033	Canola	cytosol, mitochondrion	34.84	35.53
Bra012309.1-P	Field mustard	nucleus	36.13	35.44
Os02t0751300-01	Rice	mitochondrion	33.55	35.37
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	47.1	35.1
CDY14641	Canola	mitochondrion	36.77	34.97
Bra003661.1-P	Field mustard	cytosol, mitochondrion	34.19	34.87
CDY00425	Canola	nucleus	35.48	34.81
CDY38242	Canola	mitochondrion, nucleus	33.55	33.12
HORVU6Hr1G073620.1	Barley	mitochondrion	27.74	31.85
TraesCS6B01G331900.1	Wheat	mitochondrion	31.61	31.82
TraesCS6D01G282200.1	Wheat	mitochondrion	30.97	31.17
TraesCS6A01G302700.1	Wheat	mitochondrion	30.97	30.0
TraesCS6A01G295900.1	Wheat	mitochondrion	24.52	26.95
TraesCS6D01G276300.1	Wheat	mitochondrion	23.23	25.53
TraesCS6D01G276200.1	Wheat	mitochondrion	23.23	24.32
TraesCS6A01G295600.1	Wheat	mitochondrion	23.23	24.32
TraesCS6A01G295800.1	Wheat	mitochondrion	21.94	24.11
TraesCS6B01G325700.1	Wheat	mitochondrion	23.23	23.84
TraesCS6B01G325800.1	Wheat	nucleus, plastid	23.23	22.22
HORVU6Hr1G075130.1	Barley	mitochondrion	19.35	18.52

Protein Annotations

EnsemblPlants:GSMUA_Achr6P02010_001	EnsemblPlants:GSMUA_Achr6T02010_001	EnsemblPlantsGene:GSMUA_Achr6G02010_001	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF4	PFAM:PF04570	PFscan:PS51795	SEG:seg	UniParc:UPI000296E781	UniProt:M0T3E9
MapMan:27.3.3	:	:	:	:	:

Description

Putative DUF581 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G02010_001]

Coordinates

chr6:-:1302479..1304193

Molecular Weight (calculated)

17072.2 Da

IEP (calculated)

10.278

GRAVY (calculated)

-0.794

Length

155 amino acids

Sequence
(BLAST)

001: MLLRKRQRPP MRRTTSMTEF AAEVEGPVTA DQVGAENQSR RPHILQKQRN QRRAAEAALW RSGGAGGRRR NSGNFAVVET ASFLMACGLC KRRLGPGRDT
101: FMYRGDIAFC SLECRQQHMN QDEPKEKCSL TSLKDTPPAT NGSESSDGGE TVAAA

Best Arabidopsis Sequence Match ( AT1G22160.1 )
(BLAST)

001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV

Arabidopsis Description

Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.