Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d005108_P003 | |
| Zm00001d010811_P002 | |
| Zm00001d038745_P002 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22160.1 | Zm00001d005108_P003 | AT3G29160.1 | 21798944 |
| AT1G22160.1 | Zm00001d010811_P002 | AT3G29160.1 | 21798944 |
| AT1G22160.1 | Zm00001d038745_P002 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052234_P001 | Maize | plastid | 72.05 | 73.89 |
| KXG30742 | Sorghum | plastid | 61.49 | 61.11 |
| Os02t0751300-01 | Rice | mitochondrion | 43.48 | 47.62 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 36.65 | 45.04 |
| CDX79242 | Canola | mitochondrion | 4.97 | 44.44 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 40.99 | 42.86 |
| TraesCS6B01G331900.1 | Wheat | mitochondrion | 40.37 | 42.21 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 37.27 | 41.1 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 37.89 | 39.35 |
| GSMUA_Achr10P... | Banana | nucleus | 35.4 | 38.78 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 38.51 | 38.75 |
| KRH18875 | Soybean | mitochondrion | 34.16 | 38.46 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 34.16 | 36.18 |
| Zm00001d044849_P001 | Maize | plastid | 34.16 | 35.03 |
| KRH16681 | Soybean | mitochondrion | 32.3 | 34.44 |
| KRH62389 | Soybean | mitochondrion | 28.57 | 33.82 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 33.54 | 33.54 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 27.95 | 33.33 |
| Zm00001d020264_P001 | Maize | nucleus | 36.65 | 32.6 |
| KRH53114 | Soybean | nucleus | 29.81 | 31.17 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 26.71 | 31.16 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 26.71 | 31.16 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 30.43 | 30.82 |
| Zm00001d005657_P002 | Maize | nucleus | 33.54 | 30.51 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 26.71 | 30.5 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 26.09 | 29.79 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 26.09 | 29.79 |
| Solyc04g072780.2.1 | Tomato | nucleus | 31.06 | 29.76 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 27.33 | 29.73 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 27.33 | 29.73 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 28.57 | 29.68 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 28.57 | 28.4 |
| Zm00001d032292_P001 | Maize | mitochondrion | 32.92 | 28.04 |
| CDY38242 | Canola | mitochondrion, nucleus | 27.33 | 28.03 |
| CDY21344 | Canola | nucleus | 27.33 | 28.03 |
| Bra031369.1-P | Field mustard | nucleus | 27.33 | 28.03 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 25.47 | 27.89 |
| PGSC0003DMT400024491 | Potato | nucleus | 28.57 | 27.88 |
| Bra012309.1-P | Field mustard | nucleus | 27.33 | 27.85 |
| CDX79243 | Canola | cytosol, plastid | 19.25 | 27.68 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 21.12 | 26.98 |
| CDY01294 | Canola | nucleus | 26.09 | 26.58 |
| Bra008341.1-P | Field mustard | mitochondrion | 26.71 | 26.38 |
| CDY26845 | Canola | mitochondrion | 26.71 | 26.38 |
| CDX87485 | Canola | cytosol, mitochondrion | 24.84 | 25.97 |
| CDX88407 | Canola | cytosol, mitochondrion | 24.84 | 25.97 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 24.84 | 25.97 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 33.54 | 25.96 |
| CDY00425 | Canola | nucleus | 25.47 | 25.95 |
| Zm00001d050285_P001 | Maize | mitochondrion | 29.81 | 25.95 |
| TraesCS6B01G325700.1 | Wheat | mitochondrion | 24.22 | 25.83 |
| CDY14641 | Canola | mitochondrion | 26.09 | 25.77 |
| AT1G78020.1 | Thale cress | mitochondrion | 25.47 | 25.31 |
| CDX68033 | Canola | cytosol, mitochondrion | 22.36 | 23.68 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 22.36 | 23.68 |
| HORVU6Hr1G075130.1 | Barley | mitochondrion | 20.5 | 20.37 |
Protein Annotations
| EnsemblPlants:Zm00001d018076_P001 | EnsemblPlants:Zm00001d018076_T001 | EnsemblPlantsGene:Zm00001d018076 | EntrezGene:103627751 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 | PFAM:PF04570 | PFscan:PS51795 | ProteinID:AQK74973.1 | SEG:seg |
| UniParc:UPI000221E553 | UniProt:A0A1D6HKM0 | MapMan:27.3.3 | : | : | : |
Description
No Description!
Coordinates
chr5:+:213819658..213821136
Molecular Weight (calculated)
16765.7 Da
IEP (calculated)
6.484
GRAVY (calculated)
-0.278
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPAERIESA GTALGKRPRS RVLPRTASMV TVPSAAKQGR QERGAGVPSS CSLPAACAGM VAVPGGYYYC GTSFAAVETA AFLKACGLCK RHLGPGHDTF
101: IYRGEVAFCS QECREKQIEY DDLDERMEQT CSVTSMKEAP SVSGASGSDQ SGSGGETVAA A
101: IYRGEVAFCS QECREKQIEY DDLDERMEQT CSVTSMKEAP SVSGASGSDQ SGSGGETVAA A
001: MLLGNRPRPQ MQRTASITRI TIEVDGDQTA GQDSDVSMTV VDGGENYAQR FLSPVNHQRN ERKYGGRSSP SSFLVNCGFC KRGLAPGRDI YMYKGDAAFC
101: SIECREQQME HDEGKTRNRV VLSPSK
101: SIECREQQME HDEGKTRNRV VLSPSK
Arabidopsis Description
Protein of unknown function (DUF581) [Source:TAIR;Acc:AT4G39795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.