Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra025379.1-P | |
| Bra033088.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22160.1 | Bra025379.1-P | AT3G29160.1 | 21798944 |
| AT1G22160.1 | Bra033088.1-P | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00425 | Canola | nucleus | 94.94 | 94.94 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 65.82 | 70.75 |
| Bra031369.1-P | Field mustard | nucleus | 70.25 | 70.7 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 55.06 | 57.24 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 53.8 | 55.19 |
| Bra008341.1-P | Field mustard | mitochondrion | 55.06 | 53.37 |
| KRH18875 | Soybean | mitochondrion | 43.67 | 48.25 |
| KRH16681 | Soybean | mitochondrion | 44.94 | 47.02 |
| KRH62389 | Soybean | mitochondrion | 38.61 | 44.85 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 36.71 | 44.27 |
| Solyc04g072780.2.1 | Tomato | nucleus | 45.57 | 42.86 |
| PGSC0003DMT400024491 | Potato | nucleus | 43.04 | 41.21 |
| Bra031889.1-P | Field mustard | cytosol | 25.32 | 40.4 |
| KRH53114 | Soybean | nucleus | 39.24 | 40.26 |
| GSMUA_Achr10P... | Banana | nucleus | 37.34 | 40.14 |
| Bra011831.1-P | Field mustard | cytosol | 28.48 | 39.13 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 31.01 | 38.89 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 37.34 | 38.82 |
| TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 34.18 | 38.57 |
| TraesCS7A01G182100.1 | Wheat | mitochondrion | 33.54 | 38.41 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 35.44 | 38.36 |
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 34.18 | 38.03 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 37.34 | 36.65 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 35.44 | 36.13 |
| OQU76080 | Sorghum | cytosol | 29.75 | 35.07 |
| Os06t0223700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 31.01 | 34.51 |
| TraesCS5D01G200000.1 | Wheat | cytosol | 35.44 | 33.73 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 32.28 | 32.9 |
| TraesCS5A01G191000.1 | Wheat | cytosol | 34.18 | 32.53 |
| Zm00001d050285_P001 | Maize | mitochondrion | 37.97 | 32.43 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 42.41 | 32.21 |
| Zm00001d020264_P001 | Maize | nucleus | 36.08 | 31.49 |
| EES14968 | Sorghum | mitochondrion | 39.24 | 31.16 |
| Zm00001d032292_P001 | Maize | mitochondrion | 36.71 | 30.69 |
| EER96652 | Sorghum | nucleus | 37.34 | 29.95 |
| Os02t0751300-01 | Rice | mitochondrion | 27.85 | 29.93 |
| TraesCS6B01G331900.1 | Wheat | mitochondrion | 29.11 | 29.87 |
| Os09t0367900-02 | Rice | cytosol | 32.91 | 29.55 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 28.48 | 29.22 |
| Os08t0407600-01 | Rice | mitochondrion | 36.08 | 28.64 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 24.05 | 28.15 |
| Zm00001d044849_P001 | Maize | plastid | 27.85 | 28.03 |
| Zm00001d005657_P002 | Maize | nucleus | 31.01 | 27.68 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 27.85 | 27.67 |
| Zm00001d018076_P001 | Maize | plastid | 27.85 | 27.33 |
| KXG30742 | Sorghum | plastid | 27.85 | 27.16 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 27.22 | 26.88 |
| Zm00001d052234_P001 | Maize | plastid | 25.95 | 26.11 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 21.52 | 24.11 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 20.25 | 22.7 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 20.25 | 22.7 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 20.89 | 20.37 |
| HORVU6Hr1G075130.1 | Barley | mitochondrion | 20.89 | 20.37 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 18.99 | 20.27 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 17.09 | 18.24 |
| TraesCS6B01G325700.1 | Wheat | mitochondrion | 17.09 | 17.88 |
Protein Annotations
| EnsemblPlants:Bra012309.1 | EnsemblPlants:Bra012309.1-P | EnsemblPlantsGene:Bra012309 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF74 | PFAM:PF04570 | PFscan:PS51795 | UniParc:UPI00025414A2 | UniProt:M4D749 | MapMan:27.3.3 |
Description
AT1G22160 (E=2e-057) | senescence-associated protein-related
Coordinates
chrA07:-:8640927..8641540
Molecular Weight (calculated)
17749.3 Da
IEP (calculated)
10.181
GRAVY (calculated)
-0.669
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGKRQRPQ IKRTTSLSEI KFDLNLPNEP EEPSDHQVQM LSNPKGKLVT VDEQRQAHHG LLDQRLLATV SPRGTQRRHS ADHSTHAGAD FLRSCSLCKR
101: LLVPGRDIYM YRGDRAFCSL ECRQQQITVD EKKEKSLVRS TFVVGAGSGK GERLSAAV
101: LLVPGRDIYM YRGDRAFCSL ECRQQQITVD EKKEKSLVRS TFVVGAGSGK GERLSAAV
001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
Arabidopsis Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.