Factsheet for Bra011831.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71221	Canola	cytosol, nucleus, plastid	51.3	61.46
AT4G39795.1	Thale cress	mitochondrion	53.04	48.41
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	42.61	31.82
Bra003661.1-P	Field mustard	cytosol, mitochondrion	41.74	31.58
Bra008341.1-P	Field mustard	mitochondrion	40.87	28.83
Bra031369.1-P	Field mustard	nucleus	39.13	28.66
Bra012309.1-P	Field mustard	nucleus	39.13	28.48
Bra031889.1-P	Field mustard	cytosol	24.35	28.28

Protein Annotations

EnsemblPlants:Bra011831.1	EnsemblPlants:Bra011831.1-P	EnsemblPlantsGene:Bra011831	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF4	PFAM:PF04570	PFscan:PS51795	UniParc:UPI000254622B	UniProt:M4D5S4	MapMan:27.3.3

Description

AT4G39795 (E=6e-037) | senescence-associated protein-related

Coordinates

chrA01:+:328553..329214

Molecular Weight (calculated)

12867.1 Da

IEP (calculated)

7.248

GRAVY (calculated)

-0.715

Length

115 amino acids

Sequence
(BLAST)

001: MPRITIEVDD NHTAGQDSDV SMAVVDGGDN FDQRFLAMLS PRNHTRTERK DCGKSTLPSS SFLGSCGFCK RRLAPGRDIY MYKGDAAFCS MECREQQIEQ
101: DRQNSKQSAR VVLSP

Best Arabidopsis Sequence Match ( AT4G39795.1 )
(BLAST)

001: MLLGNRPRPQ MQRTASITRI TIEVDGDQTA GQDSDVSMTV VDGGENYAQR FLSPVNHQRN ERKYGGRSSP SSFLVNCGFC KRGLAPGRDI YMYKGDAAFC
101: SIECREQQME HDEGKTRNRV VLSPSK

Arabidopsis Description

Protein of unknown function (DUF581) [Source:TAIR;Acc:AT4G39795]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.