Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011831.1-P | Field mustard | cytosol | 61.46 | 51.3 |
| AT4G39795.1 | Thale cress | mitochondrion | 42.71 | 32.54 |
| CDX72671 | Canola | cytosol | 43.75 | 32.06 |
| CDX79243 | Canola | cytosol, plastid | 30.21 | 25.89 |
| CDY31291 | Canola | cytosol | 29.17 | 24.35 |
| CDY08827 | Canola | mitochondrion | 27.08 | 23.85 |
| CDY21344 | Canola | nucleus | 38.54 | 23.57 |
| CDY33991 | Canola | mitochondrion | 28.12 | 23.48 |
| CDY01294 | Canola | nucleus | 37.5 | 22.78 |
| CDY38242 | Canola | mitochondrion, nucleus | 36.46 | 22.29 |
| CDY00425 | Canola | nucleus | 36.46 | 22.15 |
| CDX88407 | Canola | cytosol, mitochondrion | 35.42 | 22.08 |
| CDX87485 | Canola | cytosol, mitochondrion | 35.42 | 22.08 |
| CDX68033 | Canola | cytosol, mitochondrion | 33.33 | 21.05 |
| CDY14641 | Canola | mitochondrion | 34.38 | 20.25 |
| CDY26845 | Canola | mitochondrion | 34.38 | 20.25 |
| CDX79242 | Canola | mitochondrion | 1.04 | 5.56 |
Protein Annotations
| EnsemblPlants:CDY71221 | EnsemblPlantsGene:GSBRNA2T00012138001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDY71221 | ProteinID:CDY71221.1 | UniParc:UPI0004EE45C1 | UniProt:A0A078K064 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
BnaUnng04250DBnaUnng04250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K064]
Coordinates
chrLK044954:+:59..798
Molecular Weight (calculated)
10851.8 Da
IEP (calculated)
8.609
GRAVY (calculated)
-0.752
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MAVVDGGDNY DQRFFAMLSP RNHTRTERKD CGKSTLPSSS FLGSCGFCKR RLAPGRDIYM YKGDAAFCCM ECREQQIEQD RQNSKQSARV VLSPSN
001: MLLGNRPRPQ MQRTASITRI TIEVDGDQTA GQDSDVSMTV VDGGENYAQR FLSPVNHQRN ERKYGGRSSP SSFLVNCGFC KRGLAPGRDI YMYKGDAAFC
101: SIECREQQME HDEGKTRNRV VLSPSK
101: SIECREQQME HDEGKTRNRV VLSPSK
Arabidopsis Description
Protein of unknown function (DUF581) [Source:TAIR;Acc:AT4G39795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.