Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G39795.1 | Thale cress | mitochondrion | 70.99 | 73.81 |
| CDX79242 | Canola | mitochondrion | 6.87 | 50.0 |
| CDY71221 | Canola | cytosol, nucleus, plastid | 32.06 | 43.75 |
| CDX87485 | Canola | cytosol, mitochondrion | 43.51 | 37.01 |
| CDX88407 | Canola | cytosol, mitochondrion | 43.51 | 37.01 |
| CDX79243 | Canola | cytosol, plastid | 29.77 | 34.82 |
| CDY26845 | Canola | mitochondrion | 41.22 | 33.13 |
| CDX68033 | Canola | cytosol, mitochondrion | 38.17 | 32.89 |
| CDY14641 | Canola | mitochondrion | 40.46 | 32.52 |
| CDY31291 | Canola | cytosol | 28.24 | 32.17 |
| CDY33991 | Canola | mitochondrion | 27.48 | 31.3 |
| CDY08827 | Canola | mitochondrion | 25.95 | 31.19 |
| CDY21344 | Canola | nucleus | 36.64 | 30.57 |
| CDY01294 | Canola | nucleus | 36.64 | 30.38 |
| CDY00425 | Canola | nucleus | 35.88 | 29.75 |
| CDY38242 | Canola | mitochondrion, nucleus | 33.59 | 28.03 |
Protein Annotations
| EnsemblPlants:CDX72671 | EnsemblPlantsGene:GSBRNA2T00100246001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDX72671 | ProteinID:CDX72671.1 | SEG:seg | UniParc:UPI0004EF32CF |
| MapMan:27.3.3 | : | : | : | : | : |
Description
BnaC07g46930D
Coordinates
chrLK031796:-:2618551..2619053
Molecular Weight (calculated)
14842.4 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.844
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGNRRQPH MQRTRSITRI TIEIDDTHTA GQDSDVAMAV VDGGYNYDHR FLAMFSPRNH RRNERKDGGK SSLPSSSFLG SCGFCKRRLT PGHDIYMYKG
101: DAAFCSVECR EQQMEHDEGK ARNCDVLSPS N
101: DAAFCSVECR EQQMEHDEGK ARNCDVLSPS N
001: MLLGNRPRPQ MQRTASITRI TIEVDGDQTA GQDSDVSMTV VDGGENYAQR FLSPVNHQRN ERKYGGRSSP SSFLVNCGFC KRGLAPGRDI YMYKGDAAFC
101: SIECREQQME HDEGKTRNRV VLSPSK
101: SIECREQQME HDEGKTRNRV VLSPSK
Arabidopsis Description
Protein of unknown function (DUF581) [Source:TAIR;Acc:AT4G39795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.