Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68033 | Canola | cytosol, mitochondrion | 75.0 | 55.26 |
| CDY14641 | Canola | mitochondrion | 66.07 | 45.4 |
| CDY26845 | Canola | mitochondrion | 66.07 | 45.4 |
| CDX87485 | Canola | cytosol, mitochondrion | 61.61 | 44.81 |
| CDX88407 | Canola | cytosol, mitochondrion | 61.61 | 44.81 |
| AT1G78020.1 | Thale cress | mitochondrion | 62.5 | 43.21 |
| CDY00425 | Canola | nucleus | 55.36 | 39.24 |
| CDY21344 | Canola | nucleus | 52.68 | 37.58 |
| CDY01294 | Canola | nucleus | 52.68 | 37.34 |
| KRH18875 | Soybean | mitochondrion | 46.43 | 36.36 |
| KRH16681 | Soybean | mitochondrion | 48.21 | 35.76 |
| CDY38242 | Canola | mitochondrion, nucleus | 50.0 | 35.67 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 45.54 | 33.55 |
| GSMUA_Achr10P... | Banana | nucleus | 42.86 | 32.65 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 35.71 | 31.75 |
| KRH62389 | Soybean | mitochondrion | 38.39 | 31.62 |
| CDY71221 | Canola | cytosol, nucleus, plastid | 25.89 | 30.21 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 39.29 | 30.14 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 34.82 | 29.77 |
| CDX72671 | Canola | cytosol | 34.82 | 29.77 |
| TraesCS7A01G182100.1 | Wheat | mitochondrion | 36.61 | 29.71 |
| TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 36.61 | 29.29 |
| Os06t0223700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 36.61 | 28.87 |
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 36.61 | 28.87 |
| KRH53114 | Soybean | nucleus | 39.29 | 28.57 |
| PGSC0003DMT400024491 | Potato | nucleus | 41.96 | 28.48 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 39.29 | 28.39 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 39.29 | 28.39 |
| OQU76080 | Sorghum | cytosol | 33.93 | 28.36 |
| CDY33991 | Canola | mitochondrion | 28.57 | 27.83 |
| CDY08827 | Canola | mitochondrion | 26.79 | 27.52 |
| CDY31291 | Canola | cytosol | 27.68 | 26.96 |
| Solyc04g072780.2.1 | Tomato | nucleus | 40.18 | 26.79 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 48.21 | 25.96 |
| TraesCS5D01G200000.1 | Wheat | cytosol | 38.39 | 25.9 |
| TraesCS5A01G191000.1 | Wheat | cytosol | 38.39 | 25.9 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 36.61 | 25.47 |
| Zm00001d050285_P001 | Maize | mitochondrion | 41.96 | 25.41 |
| Zm00001d032292_P001 | Maize | mitochondrion | 42.86 | 25.4 |
| EES14968 | Sorghum | mitochondrion | 44.64 | 25.13 |
| Os09t0367900-02 | Rice | cytosol | 39.29 | 25.0 |
| Zm00001d020264_P001 | Maize | nucleus | 40.18 | 24.86 |
| Zm00001d005657_P002 | Maize | nucleus | 38.39 | 24.29 |
| Os08t0407600-01 | Rice | mitochondrion | 42.86 | 24.12 |
| Zm00001d044849_P001 | Maize | plastid | 31.25 | 22.29 |
| EER96652 | Sorghum | nucleus | 37.5 | 21.32 |
| Zm00001d052234_P001 | Maize | plastid | 28.57 | 20.38 |
| KXG30742 | Sorghum | plastid | 29.46 | 20.37 |
| TraesCS6B01G331900.1 | Wheat | mitochondrion | 27.68 | 20.13 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 28.57 | 20.13 |
| Os02t0751300-01 | Rice | mitochondrion | 25.89 | 19.73 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 26.79 | 19.48 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 23.21 | 19.26 |
| Zm00001d018076_P001 | Maize | plastid | 27.68 | 19.25 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 25.89 | 18.12 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 22.32 | 17.73 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 21.43 | 17.02 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 22.32 | 16.89 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 20.54 | 16.31 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 21.43 | 16.22 |
| TraesCS6B01G325700.1 | Wheat | mitochondrion | 21.43 | 15.89 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 22.32 | 15.43 |
| HORVU6Hr1G075130.1 | Barley | mitochondrion | 15.18 | 10.49 |
| CDX79242 | Canola | mitochondrion | 0.89 | 5.56 |
Protein Annotations
| EnsemblPlants:CDX79243 | EnsemblPlantsGene:GSBRNA2T00131859001 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF74 |
| PFAM:PF04570 | PFscan:PS51795 | ProteinID:CDX79243 | ProteinID:CDX79243.1 | UniParc:UPI0004EE6A88 | MapMan:27.3.3 |
Description
BnaC06g20600D
Coordinates
chrLK031817:+:625018..625511
Molecular Weight (calculated)
12195.5 Da
IEP (calculated)
8.977
GRAVY (calculated)
-0.458
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEPYVSNGQ LVAAAVDQRL LAMVSPRGNL RRHSGDFSDA GHFLRSCSLC ERLLVPGRDI YMYRGDTAFC SLDCRQQQMA QDEWKEKGKP AKESTVATSG
101: KAGKGGRAST AV
101: KAGKGGRAST AV
001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
Arabidopsis Description
F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.