Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 90.78 | 90.78 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 84.4 | 84.4 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 84.4 | 73.46 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 60.99 | 58.11 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 52.48 | 54.81 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 45.39 | 40.0 |
| Os02t0751300-01 | Rice | mitochondrion | 34.04 | 32.65 |
| KXG30742 | Sorghum | plastid | 33.33 | 29.01 |
| Zm00001d052234_P001 | Maize | plastid | 31.21 | 28.03 |
| CDX79242 | Canola | mitochondrion | 3.55 | 27.78 |
| GSMUA_Achr10P... | Banana | nucleus | 28.37 | 27.21 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 24.82 | 26.72 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 23.4 | 26.19 |
| Zm00001d018076_P001 | Maize | plastid | 29.79 | 26.09 |
| TraesCS7A01G182100.1 | Wheat | mitochondrion | 25.53 | 26.09 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 26.95 | 25.0 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 25.53 | 24.66 |
| KRH18875 | Soybean | mitochondrion | 23.4 | 23.08 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 24.82 | 22.58 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 25.53 | 22.36 |
| KRH62389 | Soybean | mitochondrion | 21.28 | 22.06 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 24.11 | 21.94 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 21.28 | 21.74 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 21.28 | 21.74 |
| TraesCS5A01G191000.1 | Wheat | cytosol | 25.53 | 21.69 |
| CDX79243 | Canola | cytosol, plastid | 17.02 | 21.43 |
| KRH16681 | Soybean | mitochondrion | 22.7 | 21.19 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 21.99 | 21.09 |
| KRH53114 | Soybean | nucleus | 22.7 | 20.78 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 23.4 | 20.75 |
| CDY38242 | Canola | mitochondrion, nucleus | 22.7 | 20.38 |
| Bra012309.1-P | Field mustard | nucleus | 22.7 | 20.25 |
| Solyc04g072780.2.1 | Tomato | nucleus | 23.4 | 19.64 |
| CDY01294 | Canola | nucleus | 21.99 | 19.62 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 21.28 | 19.48 |
| CDX88407 | Canola | cytosol, mitochondrion | 21.28 | 19.48 |
| CDX87485 | Canola | cytosol, mitochondrion | 21.28 | 19.48 |
| PGSC0003DMT400024491 | Potato | nucleus | 22.7 | 19.39 |
| AT1G78020.1 | Thale cress | mitochondrion | 21.99 | 19.14 |
| Bra031369.1-P | Field mustard | nucleus | 21.28 | 19.11 |
| CDY21344 | Canola | nucleus | 21.28 | 19.11 |
| CDY00425 | Canola | nucleus | 21.28 | 18.99 |
| CDY14641 | Canola | mitochondrion | 21.28 | 18.4 |
| CDY26845 | Canola | mitochondrion | 20.57 | 17.79 |
| Bra008341.1-P | Field mustard | mitochondrion | 20.57 | 17.79 |
| CDX68033 | Canola | cytosol, mitochondrion | 19.15 | 17.76 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 19.15 | 17.76 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 24.11 | 16.35 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G295800.1 | EnsemblPlantsGene:TraesCS6A01G295800 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PFAM:PF04570 |
| PFscan:PS51795 | SEG:seg | MapMan:27.3.3 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:529485379..529486854
Molecular Weight (calculated)
15313.6 Da
IEP (calculated)
10.736
GRAVY (calculated)
-0.287
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKEQQRSIV LRRKFSVASI PSAARRVRQV SGDDKKAHAP PIFFVSANTV KMSAGGGATP YLKRDTFVGL WMAAAFLAAC GICRKPLAGE DAYIYRGEFA
101: FCSDECRELY IKWKRACSLR SRGKAPSKKS RSSGGSCGGP G
101: FCSDECRELY IKWKRACSLR SRGKAPSKKS RSSGGSCGGP G
001: MLTKRTHPMI GKISELLVGV NRSTAAPFFD VLMTSPKSPL DFKILPQISQ RNSSKRFYDD NLGGSVGLGI VAALENSNTR RITSVCRSEP NQPGRSDPVQ
101: FMSHGGSTDG EDEEMFIMDE EDYTLVTCHH GPSGSCNTRV YDKDGFECFS SKINDDRRER LFVVDVVTES PENSPEFQGL GFLNSCYLCR KKLHGQDIFI
201: YRGEKAFCST ECRSSHIAND ERKERCRSKF STSPYTAGQI FSTGVLVT
101: FMSHGGSTDG EDEEMFIMDE EDYTLVTCHH GPSGSCNTRV YDKDGFECFS SKINDDRRER LFVVDVVTES PENSPEFQGL GFLNSCYLCR KKLHGQDIFI
201: YRGEKAFCST ECRSSHIAND ERKERCRSKF STSPYTAGQI FSTGVLVT
Arabidopsis Description
At5g20700 [Source:UniProtKB/TrEMBL;Acc:Q8GYX2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.