Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 84.4 | 84.4 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 83.69 | 83.69 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 80.14 | 69.75 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 66.67 | 63.51 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 53.9 | 56.3 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 42.55 | 38.96 |
| CDX79242 | Canola | mitochondrion | 4.26 | 33.33 |
| Os02t0751300-01 | Rice | mitochondrion | 34.04 | 32.65 |
| KXG30742 | Sorghum | plastid | 32.62 | 28.4 |
| GSMUA_Achr10P... | Banana | nucleus | 28.37 | 27.21 |
| Zm00001d052234_P001 | Maize | plastid | 29.79 | 26.75 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 24.82 | 26.72 |
| Zm00001d018076_P001 | Maize | plastid | 29.79 | 26.09 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 26.95 | 25.0 |
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 24.82 | 24.65 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 21.99 | 24.6 |
| KRH18875 | Soybean | mitochondrion | 24.82 | 24.48 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 26.24 | 23.87 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 24.11 | 23.29 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 25.53 | 23.23 |
| KRH16681 | Soybean | mitochondrion | 24.11 | 22.52 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 25.53 | 22.36 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 22.7 | 21.77 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 21.28 | 21.74 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 21.28 | 21.74 |
| KRH62389 | Soybean | mitochondrion | 20.57 | 21.32 |
| TraesCS5D01G200000.1 | Wheat | cytosol | 24.82 | 21.08 |
| KRH53114 | Soybean | nucleus | 22.7 | 20.78 |
| CDX79243 | Canola | cytosol, plastid | 16.31 | 20.54 |
| Bra012309.1-P | Field mustard | nucleus | 22.7 | 20.25 |
| CDX88407 | Canola | cytosol, mitochondrion | 21.99 | 20.13 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 21.99 | 20.13 |
| CDX87485 | Canola | cytosol, mitochondrion | 21.99 | 20.13 |
| AT1G78020.1 | Thale cress | mitochondrion | 22.7 | 19.75 |
| CDY38242 | Canola | mitochondrion, nucleus | 21.99 | 19.75 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 21.99 | 19.5 |
| Bra031369.1-P | Field mustard | nucleus | 21.28 | 19.11 |
| CDY21344 | Canola | nucleus | 21.28 | 19.11 |
| Solyc04g072780.2.1 | Tomato | nucleus | 22.7 | 19.05 |
| CDY00425 | Canola | nucleus | 21.28 | 18.99 |
| PGSC0003DMT400024491 | Potato | nucleus | 21.99 | 18.79 |
| CDY14641 | Canola | mitochondrion | 21.28 | 18.4 |
| CDY01294 | Canola | nucleus | 20.57 | 18.35 |
| CDY26845 | Canola | mitochondrion | 20.57 | 17.79 |
| Bra008341.1-P | Field mustard | mitochondrion | 20.57 | 17.79 |
| CDX68033 | Canola | cytosol, mitochondrion | 19.15 | 17.76 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 19.15 | 17.76 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 23.4 | 15.87 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G276300.1 | EnsemblPlantsGene:TraesCS6D01G276300 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | MapMan:27.3.3 | : | : |
Description
No Description!
Coordinates
chr6D:+:385222793..385224271
Molecular Weight (calculated)
15652.8 Da
IEP (calculated)
11.184
GRAVY (calculated)
-0.494
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKERQRSIV VRRKFSVASI PSAARRVRQV SGDDKKARAR PIFFVSANTV QMGAGGGGHH FLKRDAFTGL WMTAAFLAAC GVCRQPLADE DAYIYRGEFA
101: FCSDECRELY IKWKRACSRR SRRKAPSNKS SNSRGSCGGP G
101: FCSDECRELY IKWKRACSRR SRRKAPSNKS SNSRGSCGGP G
1: MASYYSGFLG CEEPHFLESC SLCRKHLGLN SDIFMYRGDK AFCSNECREE QIESDEAKER KWKKSSRSLR KNSSETKESA AGNTVRTGTL VVA
Arabidopsis Description
At2g44670/F16B22.16 [Source:UniProtKB/TrEMBL;Acc:O80506]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.