Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G081310.4 | |
| HORVU3Hr1G069190.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22160.1 | HORVU1Hr1G081310.4 | AT3G29160.1 | 21798944 |
| AT1G22160.1 | HORVU3Hr1G069190.1 | AT3G29160.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79242 | Canola | mitochondrion | 7.41 | 55.56 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 59.26 | 54.05 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 56.3 | 53.9 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 55.56 | 53.19 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 54.81 | 52.48 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 56.3 | 51.35 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 56.3 | 46.91 |
| TraesCS6B01G325700.1 | Wheat | mitochondrion | 48.15 | 43.05 |
| HORVU6Hr1G075130.1 | Barley | mitochondrion | 42.22 | 35.19 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 31.11 | 32.06 |
| Os02t0751300-01 | Rice | mitochondrion | 34.81 | 31.97 |
| GSMUA_Achr10P... | Banana | nucleus | 32.59 | 29.93 |
| Zm00001d052234_P001 | Maize | plastid | 34.07 | 29.3 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 30.37 | 28.08 |
| Zm00001d018076_P001 | Maize | plastid | 33.33 | 27.95 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 31.85 | 27.74 |
| KXG30742 | Sorghum | plastid | 32.59 | 27.16 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 30.37 | 26.97 |
| KRH18875 | Soybean | mitochondrion | 27.41 | 25.87 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 23.7 | 25.4 |
| Solyc12g056950.1.1 | Tomato | cytosol, mitochondrion | 25.93 | 25.36 |
| PGSC0003DMT400022055 | Potato | mitochondrion | 25.93 | 25.36 |
| CDX88407 | Canola | cytosol, mitochondrion | 28.89 | 25.32 |
| CDY01294 | Canola | nucleus | 29.63 | 25.32 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 29.63 | 24.84 |
| Bra015639.1-P | Field mustard | cytosol, mitochondrion, plastid | 28.15 | 24.68 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 28.15 | 24.52 |
| AT1G22160.1 | Thale cress | mitochondrion, nucleus | 26.67 | 24.49 |
| KRH62389 | Soybean | mitochondrion | 24.44 | 24.26 |
| CDY38242 | Canola | mitochondrion, nucleus | 28.15 | 24.2 |
| Bra012309.1-P | Field mustard | nucleus | 28.15 | 24.05 |
| CDX87485 | Canola | cytosol, mitochondrion | 27.41 | 24.03 |
| KRH16681 | Soybean | mitochondrion | 26.67 | 23.84 |
| CDY21344 | Canola | nucleus | 27.41 | 23.57 |
| Bra031369.1-P | Field mustard | nucleus | 27.41 | 23.57 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 27.41 | 23.27 |
| CDX79243 | Canola | cytosol, plastid | 19.26 | 23.21 |
| CDY00425 | Canola | nucleus | 26.67 | 22.78 |
| Solyc04g072780.2.1 | Tomato | nucleus | 28.15 | 22.62 |
| KRH53114 | Soybean | nucleus | 25.19 | 22.08 |
| PGSC0003DMT400024491 | Potato | nucleus | 26.67 | 21.82 |
| CDY14641 | Canola | mitochondrion | 25.93 | 21.47 |
| CDX68033 | Canola | cytosol, mitochondrion | 23.7 | 21.05 |
| Bra003661.1-P | Field mustard | cytosol, mitochondrion | 23.7 | 21.05 |
| AT1G78020.1 | Thale cress | mitochondrion | 25.19 | 20.99 |
| Bra008341.1-P | Field mustard | mitochondrion | 25.19 | 20.86 |
| CDY26845 | Canola | mitochondrion | 25.19 | 20.86 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 27.41 | 17.79 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G073620.1 | EnsemblPlantsGene:HORVU6Hr1G073620 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 | PANTHER:PTHR33059:SF4 |
| PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI000B4773CD | UniProt:A0A287UNV1 | MapMan:27.3.3 |
Description
No Description!
Coordinates
chrchr6H:+:509817134..509818932
Molecular Weight (calculated)
14885.9 Da
IEP (calculated)
10.119
GRAVY (calculated)
-0.417
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRKRQRSML MRRTTSLAST PRQVRQVGGD GKQARARPIF YVSADTVEMG AAYVRRDAFS GLLVAAAFLT ACGICSKSLR GIDIYIYRGE FSFCSDECRE
101: QYIEMEKKYI RTSSRKAPSD QSGSSCGRGS CGGPG
101: QYIEMEKKYI RTSSRKAPSD QSGSSCGRGS CGGPG
001: MLLGNRPRPQ MQRTASITRI TIEVDGDQTA GQDSDVSMTV VDGGENYAQR FLSPVNHQRN ERKYGGRSSP SSFLVNCGFC KRGLAPGRDI YMYKGDAAFC
101: SIECREQQME HDEGKTRNRV VLSPSK
101: SIECREQQME HDEGKTRNRV VLSPSK
Arabidopsis Description
Protein of unknown function (DUF581) [Source:TAIR;Acc:AT4G39795]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.