Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 3
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012309.1-P | Field mustard | nucleus | 70.75 | 65.82 |
| CDY00425 | Canola | nucleus | 68.71 | 63.92 |
| Bra031369.1-P | Field mustard | nucleus | 66.67 | 62.42 |
| CDY21344 | Canola | nucleus | 66.67 | 62.42 |
| CDY38242 | Canola | mitochondrion, nucleus | 63.95 | 59.87 |
| CDY01294 | Canola | nucleus | 62.59 | 58.23 |
| AT1G78020.1 | Thale cress | mitochondrion | 58.5 | 53.09 |
| KRH18875 | Soybean | mitochondrion | 48.98 | 50.35 |
| KRH16681 | Soybean | mitochondrion | 48.98 | 47.68 |
| KRH62389 | Soybean | mitochondrion | 43.54 | 47.06 |
| GSMUA_Achr3P04440_001 | Banana | mitochondrion | 41.5 | 46.56 |
| KRH53114 | Soybean | nucleus | 44.9 | 42.86 |
| Solyc04g072780.2.1 | Tomato | nucleus | 46.94 | 41.07 |
| GSMUA_Achr10P... | Banana | nucleus | 40.82 | 40.82 |
| PGSC0003DMT400024491 | Potato | nucleus | 45.58 | 40.61 |
| AT5G65040.1 | Thale cress | mitochondrion | 30.61 | 39.82 |
| GSMUA_Achr7P17710_001 | Banana | mitochondrion | 39.46 | 38.16 |
| GSMUA_Achr9P13000_001 | Banana | mitochondrion, nucleus | 37.41 | 37.67 |
| AT4G39795.1 | Thale cress | mitochondrion | 31.29 | 36.51 |
| GSMUA_Achr6P02010_001 | Banana | mitochondrion, nucleus | 37.41 | 35.48 |
| GSMUA_Achr4P01820_001 | Banana | mitochondrion | 38.78 | 35.4 |
| TraesCS7B01G086900.1 | Wheat | mitochondrion, nucleus | 32.65 | 34.29 |
| GSMUA_Achr5P24390_001 | Banana | cytosol | 29.25 | 34.13 |
| TraesCS7A01G182100.1 | Wheat | mitochondrion | 31.97 | 34.06 |
| TraesCS7D01G183500.1 | Wheat | mitochondrion | 32.65 | 33.8 |
| GSMUA_Achr6P04060_001 | Banana | mitochondrion, nucleus | 35.37 | 33.55 |
| Os06t0223700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 31.97 | 33.1 |
| TraesCS5D01G200000.1 | Wheat | cytosol | 36.73 | 32.53 |
| TraesCS5A01G191000.1 | Wheat | cytosol | 36.73 | 32.53 |
| VIT_18s0001g05020.t01 | Wine grape | extracellular, vacuole | 45.58 | 32.21 |
| OQU76080 | Sorghum | cytosol | 29.25 | 32.09 |
| Zm00001d050285_P001 | Maize | mitochondrion | 38.1 | 30.27 |
| EES14968 | Sorghum | mitochondrion | 40.14 | 29.65 |
| Os09t0367900-02 | Rice | cytosol | 35.37 | 29.55 |
| Os02t0751300-01 | Rice | mitochondrion | 29.25 | 29.25 |
| Zm00001d020264_P001 | Maize | nucleus | 35.37 | 28.73 |
| Zm00001d032292_P001 | Maize | mitochondrion | 36.73 | 28.57 |
| TraesCS6B01G331900.1 | Wheat | mitochondrion | 29.25 | 27.92 |
| Zm00001d005657_P002 | Maize | nucleus | 32.65 | 27.12 |
| GSMUA_Achr8P18580_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 29.25 | 27.04 |
| EER96652 | Sorghum | nucleus | 36.05 | 26.9 |
| HORVU6Hr1G073620.1 | Barley | mitochondrion | 24.49 | 26.67 |
| Zm00001d044849_P001 | Maize | plastid | 27.89 | 26.11 |
| TraesCS6D01G282200.1 | Wheat | mitochondrion | 27.21 | 25.97 |
| KXG30742 | Sorghum | plastid | 28.57 | 25.93 |
| Os08t0407600-01 | Rice | mitochondrion | 34.69 | 25.63 |
| Zm00001d052234_P001 | Maize | plastid | 27.21 | 25.48 |
| Zm00001d018076_P001 | Maize | plastid | 27.89 | 25.47 |
| TraesCS6A01G302700.1 | Wheat | mitochondrion | 27.21 | 25.0 |
| TraesCS6D01G276300.1 | Wheat | mitochondrion | 21.77 | 22.7 |
| TraesCS6A01G295900.1 | Wheat | mitochondrion | 21.77 | 22.7 |
| TraesCS6A01G295800.1 | Wheat | mitochondrion | 21.09 | 21.99 |
| TraesCS6A01G295600.1 | Wheat | mitochondrion | 20.41 | 20.27 |
| TraesCS6D01G276200.1 | Wheat | mitochondrion | 19.73 | 19.59 |
| TraesCS6B01G325700.1 | Wheat | mitochondrion | 19.73 | 19.21 |
| HORVU6Hr1G075130.1 | Barley | mitochondrion | 21.09 | 19.14 |
| TraesCS6B01G325800.1 | Wheat | nucleus, plastid | 21.09 | 19.14 |
Protein Annotations
| MapMan:27.3.3 | EntrezGene:838821 | UniProt:A0A178WCZ5 | ProteinID:AEE30204.1 | ArrayExpress:AT1G22160 | EnsemblPlantsGene:AT1G22160 |
| RefSeq:AT1G22160 | TAIR:AT1G22160 | RefSeq:AT1G22160-TAIR-G | EnsemblPlants:AT1G22160.1 | TAIR:AT1G22160.1 | EMBL:AY072370 |
| EMBL:AY086318 | EMBL:AY114615 | GO:GO:0008150 | InterPro:IPR007650 | RefSeq:NP_564160.1 | ProteinID:OAP16238.1 |
| PFAM:PF04570 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51795 |
| PANTHER:PTHR33059 | PANTHER:PTHR33059:SF74 | UniProt:Q8VY80 | UniParc:UPI000009DFDC | InterPro:Zf-FLZ_dom | : |
Description
Senescence-associated family protein (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8VY80]
Coordinates
chr1:+:7823066..7823971
Molecular Weight (calculated)
16965.3 Da
IEP (calculated)
10.147
GRAVY (calculated)
-0.768
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.