Factsheet for Os08t0407600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
peroxisome 1
extracellular 1
plastid 2
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os05t0530500-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22160.1	Os05t0530500-02	AT3G29160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032292_P001	Maize	mitochondrion	56.28	59.26
Zm00001d050285_P001	Maize	mitochondrion	53.27	57.3
GSMUA_Achr3P04440_001	Banana	mitochondrion	37.19	56.49
EES14968	Sorghum	mitochondrion	56.28	56.28
Os09t0367900-02	Rice	cytosol	47.24	53.41
CDX79242	Canola	mitochondrion	4.52	50.0
GSMUA_Achr6P02010_001	Banana	mitochondrion, nucleus	37.19	47.74
GSMUA_Achr9P13000_001	Banana	mitochondrion, nucleus	34.17	46.58
Os06t0223700-01	Rice	cytosol, mitochondrion, nucleus, plastid	32.16	45.07
GSMUA_Achr5P24390_001	Banana	cytosol	27.64	43.65
GSMUA_Achr10P...	Banana	nucleus	32.16	43.54
GSMUA_Achr4P01820_001	Banana	mitochondrion	34.67	42.86
CDX79243	Canola	cytosol, plastid	24.12	42.86
KRH18875	Soybean	mitochondrion	30.15	41.96
GSMUA_Achr7P17710_001	Banana	mitochondrion	31.66	41.45
KRH16681	Soybean	mitochondrion	30.15	39.74
CDY01294	Canola	nucleus	30.15	37.97
CDY21344	Canola	nucleus	29.15	36.94
Bra031369.1-P	Field mustard	nucleus	29.15	36.94
KRH62389	Soybean	mitochondrion	25.13	36.76
Bra012309.1-P	Field mustard	nucleus	28.64	36.08
AT1G78020.1	Thale cress	mitochondrion	29.15	35.8
CDX87485	Canola	cytosol, mitochondrion	27.64	35.71
Bra015639.1-P	Field mustard	cytosol, mitochondrion, plastid	27.64	35.71
CDX88407	Canola	cytosol, mitochondrion	27.64	35.71
KRH53114	Soybean	nucleus	27.64	35.71
Solyc12g056950.1.1	Tomato	cytosol, mitochondrion	24.62	35.51
PGSC0003DMT400022055	Potato	mitochondrion	24.62	35.51
CDY00425	Canola	nucleus	28.14	35.44
PGSC0003DMT400024491	Potato	nucleus	29.15	35.15
CDX68033	Canola	cytosol, mitochondrion	26.63	34.87
AT1G22160.1	Thale cress	mitochondrion, nucleus	25.63	34.69
Solyc04g072780.2.1	Tomato	nucleus	29.15	34.52
CDY38242	Canola	mitochondrion, nucleus	27.14	34.39
Bra003661.1-P	Field mustard	cytosol, mitochondrion	26.13	34.21
CDY14641	Canola	mitochondrion	27.64	33.74
Bra008341.1-P	Field mustard	mitochondrion	27.64	33.74
CDY26845	Canola	mitochondrion	27.64	33.74
GSMUA_Achr6P04060_001	Banana	mitochondrion, nucleus	26.13	33.55
GSMUA_Achr8P18580_001	Banana	cytosol, mitochondrion, nucleus, plastid	25.63	32.08
Os02t0751300-01	Rice	mitochondrion	23.12	31.29
VIT_18s0001g05020.t01	Wine grape	extracellular, vacuole	31.16	29.81

Protein Annotations

EMBL:AK099936	EnsemblPlants:Os08t0407600-01	EnsemblPlantsGene:Os08g0407600	EntrezGene:4345537	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF63	PFAM:PF04570	PFscan:PS51795	ProteinID:BAC98607.1	ProteinID:BAF23690.1
ProteinID:BAT05377.1	RefSeq:XP_015648551.1	SEG:seg	UniParc:UPI00001D6BC2	UniProt:Q6Z9W8	MapMan:27.3.3

Description

Protein of unknown function DUF581 family protein. (Os08t0407600-01)

Coordinates

chr8:-:19490442..19491638

Molecular Weight (calculated)

20862.4 Da

IEP (calculated)

4.555

GRAVY (calculated)

-0.375

Length

199 amino acids

Sequence
(BLAST)

001: MMMMGKRGGR KNPMRRTTSM TEFAPPVDVL VGGRVADEAE AEAEADEATE LEVSGGGEVE EEDAAVEEAS YGWFGAGADG AGVRADWLAA YRARAAPALA
101: GLRRNSADFS AVETAAFLRA CGLCNRRLGP GRDTFMYKGD TAFCSLECRQ QHITHEEWKE KRALAIATAA AAPPQPPPSM PDPTAAGSDN PAGGTLAAA

Best Arabidopsis Sequence Match ( AT1G78020.1 )
(BLAST)

001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV

Arabidopsis Description

F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.