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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX79242 Canola mitochondrion 11.69 100.0
Bra015639.1-P Field mustard cytosol, mitochondrion, plastid 96.75 96.75
CDX87485 Canola cytosol, mitochondrion 95.45 95.45
CDY14641 Canola mitochondrion 81.17 76.69
CDX68033 Canola cytosol, mitochondrion 75.32 76.32
CDY26845 Canola mitochondrion 79.87 75.46
AT1G78020.1 Thale cress mitochondrion 70.78 67.28
CDX79243 Canola cytosol, plastid 44.81 61.61
CDY00425 Canola nucleus 54.55 53.16
CDY21344 Canola nucleus 53.9 52.87
CDY01294 Canola nucleus 53.9 52.53
CDY38242 Canola mitochondrion, nucleus 50.65 49.68
KRH18875 Soybean mitochondrion 46.1 49.65
KRH62389 Soybean mitochondrion 40.91 46.32
KRH16681 Soybean mitochondrion 44.81 45.7
KRH53114 Soybean nucleus 44.16 44.16
CDX72671 Canola cytosol 37.01 43.51
GSMUA_Achr3P04440_001 Banana mitochondrion 36.36 42.75
GSMUA_Achr10P... Banana nucleus 39.61 41.5
GSMUA_Achr7P17710_001 Banana mitochondrion 38.96 39.47
Solyc04g072780.2.1 Tomato nucleus 42.86 39.29
CDY31291 Canola cytosol 29.22 39.13
Os06t0223700-01 Rice cytosol, mitochondrion, nucleus, plastid 35.71 38.73
GSMUA_Achr9P13000_001 Banana mitochondrion, nucleus 36.36 38.36
CDY33991 Canola mitochondrion 28.57 38.26
PGSC0003DMT400024491 Potato nucleus 40.91 38.18
CDY08827 Canola mitochondrion 26.62 37.61
GSMUA_Achr6P02010_001 Banana mitochondrion, nucleus 37.01 36.77
TraesCS7A01G182100.1 Wheat mitochondrion 32.47 36.23
GSMUA_Achr5P24390_001 Banana cytosol 29.22 35.71
CDY71221 Canola cytosol, nucleus, plastid 22.08 35.42
GSMUA_Achr4P01820_001 Banana mitochondrion 37.01 35.4
TraesCS7B01G086900.1 Wheat mitochondrion, nucleus 31.82 35.0
TraesCS7D01G183500.1 Wheat mitochondrion 31.17 33.8
VIT_18s0001g05020.t01 Wine grape extracellular, vacuole 45.45 33.65
GSMUA_Achr6P04060_001 Banana mitochondrion, nucleus 33.12 32.9
Zm00001d020264_P001 Maize nucleus 37.01 31.49
Zm00001d050285_P001 Maize mitochondrion 37.66 31.35
OQU76080 Sorghum cytosol 27.27 31.34
Zm00001d032292_P001 Maize mitochondrion 37.66 30.69
Zm00001d044849_P001 Maize plastid 30.52 29.94
EES14968 Sorghum mitochondrion 38.31 29.65
Os09t0367900-02 Rice cytosol 33.77 29.55
TraesCS5A01G191000.1 Wheat cytosol 31.82 29.52
TraesCS5D01G200000.1 Wheat cytosol 31.82 29.52
TraesCS6B01G331900.1 Wheat mitochondrion 29.22 29.22
TraesCS6D01G282200.1 Wheat mitochondrion 29.22 29.22
HORVU6Hr1G073620.1 Barley mitochondrion 25.32 28.89
Zm00001d005657_P002 Maize nucleus 32.47 28.25
TraesCS6A01G302700.1 Wheat mitochondrion 29.22 28.12
Os02t0751300-01 Rice mitochondrion 26.62 27.89
GSMUA_Achr8P18580_001 Banana cytosol, mitochondrion, nucleus, plastid 28.57 27.67
Os08t0407600-01 Rice mitochondrion 35.71 27.64
KXG30742 Sorghum plastid 28.57 27.16
EER96652 Sorghum nucleus 34.42 26.9
Zm00001d052234_P001 Maize plastid 26.62 26.11
Zm00001d018076_P001 Maize plastid 25.97 24.84
TraesCS6A01G295900.1 Wheat mitochondrion 20.78 22.7
TraesCS6A01G295600.1 Wheat mitochondrion 21.43 22.3
TraesCS6D01G276300.1 Wheat mitochondrion 20.13 21.99
TraesCS6B01G325700.1 Wheat mitochondrion 21.43 21.85
TraesCS6A01G295800.1 Wheat mitochondrion 19.48 21.28
TraesCS6D01G276200.1 Wheat mitochondrion 20.13 20.95
HORVU6Hr1G075130.1 Barley mitochondrion 19.48 18.52
TraesCS6B01G325800.1 Wheat nucleus, plastid 18.83 17.9
Protein Annotations
EnsemblPlants:CDX88407EnsemblPlantsGene:GSBRNA2T00147940001InterPro:IPR007650InterPro:Zf-FLZ_domPANTHER:PTHR33059PANTHER:PTHR33059:SF74
PFAM:PF04570PFscan:PS51795ProteinID:CDX88407ProteinID:CDX88407.1SEG:segUniParc:UPI0004EBDA54
MapMan:27.3.3:::::
Description
BnaC06g38510D
Coordinates
chrLK031855:+:823278..824483
Molecular Weight (calculated)
16784.9 Da
IEP (calculated)
9.598
GRAVY (calculated)
-0.618
Length
154 amino acids
Sequence
(BLAST)
001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES DVPSTQQSPS QNTVVGLSGS NGQYVAAAVD PRYLAMVSPR GNLRRHSGEF SDAGHFLRSC SLCERLLVPG
101: RDIYMYRGDT AFCSSECREQ QMTQDEGKEK VKPAKESGVP ARAKPGRGRA AAAV
Best Arabidopsis Sequence Match ( AT1G78020.1 )
(BLAST)
001: MLLGKRQRPP INRTTSLSEI KFDLNLPSES EPSNQQKPTV ASPYGSNGQA VTAAVDQNRG FLDQRLLSMV TPRGNLRRHS GDFSDAGHFL RSCALCERLL
101: VPGRDIYMYR GDKAFCSSEC RQEQMAQDER KEKGKSAAPA KEPAVTAPAR AKPGKGRAAA AV
Arabidopsis Description
F28K19.24 [Source:UniProtKB/TrEMBL;Acc:Q9SGZ8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.